Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RNU6-543P-201ENST00000362576 108 ntBASIC6.26□□□□□ -1.41
RNF43Q68DV7 RN7SKP292-201ENST00000365522 317 ntBASIC6.26□□□□□ -1.41
RNF43Q68DV7 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RNF43Q68DV7 AL096829.1-201ENST00000413677 457 ntBASIC6.26□□□□□ -1.41
RNF43Q68DV7 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.26□□□□□ -1.41
RNF43Q68DV7 NCOR1P3-201ENST00000420479 303 ntBASIC6.26□□□□□ -1.41
RNF43Q68DV7 MTCO3P21-201ENST00000430791 643 ntBASIC6.26□□□□□ -1.41
RNF43Q68DV7 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.26□□□□□ -1.41
RNF43Q68DV7 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.26□□□□□ -1.41
RNF43Q68DV7 CALM1P1-201ENST00000442082 433 ntBASIC6.26□□□□□ -1.41
RNF43Q68DV7 RPS26P30-201ENST00000443431 335 ntBASIC6.26□□□□□ -1.41
RNF43Q68DV7 AC005077.1-201ENST00000449226 375 ntBASIC6.26□□□□□ -1.41
RNF43Q68DV7 RGS5-217ENST00000451759 835 ntTSL 3 BASIC6.26□□□□□ -1.41
RNF43Q68DV7 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.26□□□□□ -1.41
RNF43Q68DV7 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC6.26□□□□□ -1.41
RNF43Q68DV7 GEMIN2P1-201ENST00000454246 752 ntBASIC6.26□□□□□ -1.41
RNF43Q68DV7 RANP1-206ENST00000455094 651 ntBASIC6.26□□□□□ -1.41
RNF43Q68DV7 AC023598.1-201ENST00000472521 361 ntBASIC6.26□□□□□ -1.41
RNF43Q68DV7 AC090589.1-201ENST00000473109 362 ntBASIC6.26□□□□□ -1.41
RNF43Q68DV7 AC092865.4-201ENST00000477936 615 ntBASIC6.26□□□□□ -1.41
RNF43Q68DV7 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.26□□□□□ -1.41
RNF43Q68DV7 SNX5P1-201ENST00000505757 1041 ntBASIC6.26□□□□□ -1.41
RNF43Q68DV7 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RNF43Q68DV7 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.26□□□□□ -1.41
RNF43Q68DV7 RNU6-1281P-201ENST00000516223 105 ntBASIC6.26□□□□□ -1.41
RNF43Q68DV7 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RNF43Q68DV7 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC6.26□□□□□ -1.41
RNF43Q68DV7 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC6.26□□□□□ -1.41
RNF43Q68DV7 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.26□□□□□ -1.41
RNF43Q68DV7 AC011611.1-201ENST00000552179 197 ntBASIC6.26□□□□□ -1.41
RNF43Q68DV7 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.26□□□□□ -1.41
RNF43Q68DV7 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.26□□□□□ -1.41
RNF43Q68DV7 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC6.26□□□□□ -1.41
RNF43Q68DV7 RNU4ATAC-201ENST00000580972 127 ntBASIC6.26□□□□□ -1.41
RNF43Q68DV7 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.26□□□□□ -1.41
RNF43Q68DV7 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC6.26□□□□□ -1.41
RNF43Q68DV7 AC119403.2-201ENST00000590960 598 ntBASIC6.26□□□□□ -1.41
RNF43Q68DV7 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.26□□□□□ -1.41
RNF43Q68DV7 AL390838.2-201ENST00000602394 274 ntBASIC6.26□□□□□ -1.41
RNF43Q68DV7 AC011453.2-201ENST00000603737 729 ntBASIC6.26□□□□□ -1.41
RNF43Q68DV7 AC124303.1-201ENST00000605703 360 ntBASIC6.26□□□□□ -1.41
RNF43Q68DV7 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.26□□□□□ -1.41
RNF43Q68DV7 RN7SL787P-201ENST00000613000 284 ntBASIC6.26□□□□□ -1.41
RNF43Q68DV7 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF43Q68DV7 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF43Q68DV7 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RNF43Q68DV7 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.26□□□□□ -1.41
RNF43Q68DV7 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RNF43Q68DV7 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
RNF43Q68DV7 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.26□□□□□ -1.41
RNF43Q68DV7 AC119674.1-202ENST00000641333 1860 ntBASIC6.26□□□□□ -1.41
RNF43Q68DV7 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RNF43Q68DV7 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RNF43Q68DV7 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RNF43Q68DV7 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.25□□□□□ -1.41
RNF43Q68DV7 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RNF43Q68DV7 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 RNU5D-1-201ENST00000363299 116 ntBASIC6.25□□□□□ -1.41
RNF43Q68DV7 MIR143-201ENST00000385300 106 ntBASIC6.25□□□□□ -1.41
RNF43Q68DV7 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 MIR1284-201ENST00000408337 120 ntBASIC6.25□□□□□ -1.41
RNF43Q68DV7 RPS3AP3-201ENST00000411933 242 ntBASIC6.25□□□□□ -1.41
RNF43Q68DV7 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RNF43Q68DV7 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 AC018630.2-202ENST00000422992 927 ntBASIC6.25□□□□□ -1.41
RNF43Q68DV7 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 YWHAEP1-201ENST00000453697 763 ntBASIC6.25□□□□□ -1.41
RNF43Q68DV7 FGF7P3-201ENST00000454645 303 ntBASIC6.25□□□□□ -1.41
RNF43Q68DV7 RPS20P20-201ENST00000460498 340 ntBASIC6.25□□□□□ -1.41
RNF43Q68DV7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 AC017037.1-201ENST00000508460 471 ntBASIC6.25□□□□□ -1.41
RNF43Q68DV7 MTND6P2-201ENST00000512226 524 ntBASIC6.25□□□□□ -1.41
RNF43Q68DV7 RNA5SP438-201ENST00000516561 112 ntBASIC6.25□□□□□ -1.41
RNF43Q68DV7 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 KPNA2P3-201ENST00000584190 848 ntBASIC6.25□□□□□ -1.41
RNF43Q68DV7 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 RPL12P25-202ENST00000598100 674 ntBASIC6.25□□□□□ -1.41
RNF43Q68DV7 AC007687.1-201ENST00000602704 304 ntBASIC6.25□□□□□ -1.41
RNF43Q68DV7 AL136131.3-201ENST00000607600 188 ntBASIC6.25□□□□□ -1.41
RNF43Q68DV7 AC105429.2-201ENST00000610567 517 ntBASIC6.25□□□□□ -1.41
RNF43Q68DV7 AC006840.1-201ENST00000623069 542 ntBASIC6.25□□□□□ -1.41
RNF43Q68DV7 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 MIR1302-1-201ENST00000637932 143 ntBASIC6.25□□□□□ -1.41
RNF43Q68DV7 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.25□□□□□ -1.41
RNF43Q68DV7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RNF43Q68DV7 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms