Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC58Q4VC31 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC58Q4VC31 OR7E18P-201ENST00000592589 702 ntBASIC3.58□□□□□ -1.84
CCDC58Q4VC31 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC58Q4VC31 ABI1P1-201ENST00000603375 1120 ntBASIC3.58□□□□□ -1.84
CCDC58Q4VC31 AC114878.2-201ENST00000604863 1251 ntBASIC3.58□□□□□ -1.84
CCDC58Q4VC31 RMST_8.1-201ENST00000610287 165 ntBASIC3.58□□□□□ -1.84
CCDC58Q4VC31 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC58Q4VC31 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC58Q4VC31 AC138915.3-201ENST00000562908 1389 ntBASIC3.58□□□□□ -1.84
CCDC58Q4VC31 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC58Q4VC31 AL158163.1-201ENST00000603915 1649 ntBASIC3.58□□□□□ -1.84
CCDC58Q4VC31 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC58Q4VC31 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CCDC58Q4VC31 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC58Q4VC31 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC58Q4VC31 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC58Q4VC31 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC58Q4VC31 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC58Q4VC31 AL589994.1-201ENST00000404962 340 ntBASIC3.57□□□□□ -1.84
CCDC58Q4VC31 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC58Q4VC31 RN7SKP285-201ENST00000410137 318 ntBASIC3.57□□□□□ -1.84
CCDC58Q4VC31 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.57□□□□□ -1.84
CCDC58Q4VC31 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC58Q4VC31 RPEP3-201ENST00000425462 676 ntBASIC3.57□□□□□ -1.84
CCDC58Q4VC31 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC58Q4VC31 AC092809.1-201ENST00000441469 474 ntBASIC3.57□□□□□ -1.84
CCDC58Q4VC31 AC006011.1-201ENST00000442758 349 ntBASIC3.57□□□□□ -1.84
CCDC58Q4VC31 RPL7P61-201ENST00000451721 751 ntBASIC3.57□□□□□ -1.84
CCDC58Q4VC31 MTCO3P20-201ENST00000454926 688 ntBASIC3.57□□□□□ -1.84
CCDC58Q4VC31 AC016687.1-201ENST00000482574 353 ntBASIC3.57□□□□□ -1.84
CCDC58Q4VC31 SNX5P1-201ENST00000505757 1041 ntBASIC3.57□□□□□ -1.84
CCDC58Q4VC31 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC58Q4VC31 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CCDC58Q4VC31 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC58Q4VC31 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC58Q4VC31 OR8X1P-201ENST00000534542 869 ntBASIC3.57□□□□□ -1.84
CCDC58Q4VC31 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC58Q4VC31 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC58Q4VC31 AC022655.2-201ENST00000577280 318 ntBASIC3.57□□□□□ -1.84
CCDC58Q4VC31 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CCDC58Q4VC31 AL133247.2-201ENST00000603236 482 ntBASIC3.57□□□□□ -1.84
CCDC58Q4VC31 AC116667.1-201ENST00000604855 2072 ntBASIC3.57□□□□□ -1.84
CCDC58Q4VC31 AL021368.2-201ENST00000606125 5352 ntBASIC3.57□□□□□ -1.84
CCDC58Q4VC31 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC58Q4VC31 RNVU1-4-201ENST00000612985 164 ntBASIC3.57□□□□□ -1.84
CCDC58Q4VC31 AC090510.2-201ENST00000617465 629 ntBASIC3.57□□□□□ -1.84
CCDC58Q4VC31 AC016542.2-201ENST00000624201 619 ntBASIC3.57□□□□□ -1.84
CCDC58Q4VC31 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC58Q4VC31 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CCDC58Q4VC31 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC58Q4VC31 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC58Q4VC31 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC58Q4VC31 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.56□□□□□ -1.84
CCDC58Q4VC31 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CCDC58Q4VC31 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC58Q4VC31 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC58Q4VC31 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC58Q4VC31 AL353746.1-201ENST00000566293 6881 ntBASIC3.56□□□□□ -1.84
CCDC58Q4VC31 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CCDC58Q4VC31 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CCDC58Q4VC31 SNORD35B-201ENST00000363660 87 ntBASIC3.56□□□□□ -1.84
CCDC58Q4VC31 OR13C3-201ENST00000374781 1108 ntBASIC3.56□□□□□ -1.84
CCDC58Q4VC31 RPS3AP23-201ENST00000401762 784 ntBASIC3.56□□□□□ -1.84
CCDC58Q4VC31 RN7SKP182-201ENST00000410772 298 ntBASIC3.56□□□□□ -1.84
CCDC58Q4VC31 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC58Q4VC31 RPS15AP6-201ENST00000420703 385 ntBASIC3.56□□□□□ -1.84
CCDC58Q4VC31 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC58Q4VC31 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC58Q4VC31 AL358472.1-201ENST00000431295 329 ntBASIC3.56□□□□□ -1.84
CCDC58Q4VC31 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC58Q4VC31 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC58Q4VC31 DNAJC19P1-201ENST00000455312 319 ntBASIC3.56□□□□□ -1.84
CCDC58Q4VC31 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC58Q4VC31 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC58Q4VC31 AC010468.1-201ENST00000461022 817 ntBASIC3.56□□□□□ -1.84
CCDC58Q4VC31 IGBP1P5-201ENST00000507524 1000 ntBASIC3.56□□□□□ -1.84
CCDC58Q4VC31 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC58Q4VC31 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC58Q4VC31 IGLVIV-65-201ENST00000517313 360 ntBASIC3.56□□□□□ -1.84
CCDC58Q4VC31 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC58Q4VC31 MTND2P17-201ENST00000550281 688 ntBASIC3.56□□□□□ -1.84
CCDC58Q4VC31 MTND2P13-201ENST00000577438 1039 ntBASIC3.56□□□□□ -1.84
CCDC58Q4VC31 AC110743.1-201ENST00000584870 478 ntBASIC3.56□□□□□ -1.84
CCDC58Q4VC31 AL365503.1-201ENST00000605247 905 ntBASIC3.56□□□□□ -1.84
CCDC58Q4VC31 AC010857.1-201ENST00000606398 594 ntBASIC3.56□□□□□ -1.84
CCDC58Q4VC31 MIR7153-201ENST00000637758 57 ntBASIC3.56□□□□□ -1.84
CCDC58Q4VC31 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CCDC58Q4VC31 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC58Q4VC31 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CCDC58Q4VC31 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC58Q4VC31 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC58Q4VC31 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC58Q4VC31 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC58Q4VC31 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CCDC58Q4VC31 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC58Q4VC31 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC58Q4VC31 AC091152.2-201ENST00000591628 2569 ntBASIC3.55□□□□□ -1.84
CCDC58Q4VC31 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC58Q4VC31 MT-RNR1-201ENST00000389680 954 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms