Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 CEACAMP1-201ENST00000434624 1035 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 GSTM5P1-201ENST00000434751 660 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 YWHAZP8-201ENST00000436935 731 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 GAPDHP14-201ENST00000450472 937 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 SLC31A1P1-201ENST00000451221 567 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 RPL23AP35-201ENST00000451906 501 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 AC097262.1-201ENST00000452559 548 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 DDX39BP2-208ENST00000453923 258 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 RPS4XP12-201ENST00000461747 709 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 F11-205ENST00000492972 1204 ntTSL 2 BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 AC104685.1-201ENST00000502445 371 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 MTND6P2-201ENST00000512226 524 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 RN7SKP66-201ENST00000516681 231 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 AP000676.2-201ENST00000529711 301 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 AC063949.1-201ENST00000552900 865 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 AC127381.1-201ENST00000555979 939 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 SULT1C2P1-202ENST00000562418 459 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 AP005403.1-201ENST00000579720 229 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 MIR4512-201ENST00000583257 77 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 VN1R90P-201ENST00000595717 726 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 AC110760.3-201ENST00000598794 467 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 AP000811.1-201ENST00000603803 651 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 OR55B1P-203ENST00000641518 2602 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 AC144833.1-201ENST00000567953 4089 ntBASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 OR4A15-201ENST00000314706 1035 ntBASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 RN7SKP115-201ENST00000363177 317 ntBASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 RNU6-441P-201ENST00000384545 106 ntBASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 OR4K12P-201ENST00000406538 961 ntBASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 AC073264.1-201ENST00000411508 416 ntBASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 RPL37P18-201ENST00000411602 243 ntBASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 USP9YP33-201ENST00000412220 421 ntBASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 RNF10P1-201ENST00000418589 369 ntBASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 RPS20P1-201ENST00000434853 354 ntBASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 USP9YP35-201ENST00000435696 412 ntBASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 AC090804.1-201ENST00000448870 490 ntBASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 AC082651.2-201ENST00000496833 166 ntBASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 AC110775.1-201ENST00000513721 462 ntBASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 AC007954.1-201ENST00000554198 494 ntBASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 H3F3BP2-201ENST00000583907 357 ntBASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 AC011477.5-201ENST00000586571 259 ntBASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 AC072039.2-201ENST00000608883 439 ntBASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 AC091931.1-201ENST00000623488 728 ntBASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 AP001784.1-201ENST00000624107 428 ntBASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC144BQ3MJ40 OR5BR1P-201ENST00000524992 1330 ntBASIC6.15□□□□□ -1.43
CCDC144BQ3MJ40 AC011477.1-204ENST00000623416 1325 ntBASIC6.15□□□□□ -1.43
CCDC144BQ3MJ40 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC144BQ3MJ40 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC144BQ3MJ40 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
CCDC144BQ3MJ40 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
CCDC144BQ3MJ40 FER-202ENST00000438717 1531 ntTSL 2 BASIC6.15□□□□□ -1.43
CCDC144BQ3MJ40 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 MTND5P28-201ENST00000438005 1594 ntBASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 AC090971.4-201ENST00000560291 1800 ntBASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 EI24P3-201ENST00000399046 1062 ntBASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 AL133384.1-201ENST00000412744 351 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms