Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.84□□□□□ -1.63
USP41Q3LFD5 AL450263.2-201ENST00000439400 589 ntBASIC4.84□□□□□ -1.63
USP41Q3LFD5 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.84□□□□□ -1.63
USP41Q3LFD5 CASP3P1-201ENST00000446037 609 ntBASIC4.84□□□□□ -1.63
USP41Q3LFD5 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.84□□□□□ -1.63
USP41Q3LFD5 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.84□□□□□ -1.63
USP41Q3LFD5 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.84□□□□□ -1.63
USP41Q3LFD5 AL935212.3-201ENST00000450729 284 ntBASIC4.84□□□□□ -1.63
USP41Q3LFD5 NUTF2P7-201ENST00000453086 375 ntBASIC4.84□□□□□ -1.63
USP41Q3LFD5 AC108729.1-201ENST00000487812 947 ntBASIC4.84□□□□□ -1.63
USP41Q3LFD5 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.84□□□□□ -1.63
USP41Q3LFD5 RN7SKP21-201ENST00000516503 220 ntBASIC4.84□□□□□ -1.63
USP41Q3LFD5 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.84□□□□□ -1.63
USP41Q3LFD5 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.84□□□□□ -1.63
USP41Q3LFD5 ATP5F1P7-201ENST00000567330 760 ntBASIC4.84□□□□□ -1.63
USP41Q3LFD5 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.84□□□□□ -1.63
USP41Q3LFD5 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USP41Q3LFD5 AP001160.4-201ENST00000596971 382 ntBASIC4.84□□□□□ -1.63
USP41Q3LFD5 AC093673.2-201ENST00000609674 331 ntBASIC4.84□□□□□ -1.63
USP41Q3LFD5 AC055764.2-201ENST00000610089 670 ntBASIC4.84□□□□□ -1.63
USP41Q3LFD5 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USP41Q3LFD5 uc_338.9-201ENST00000617424 182 ntBASIC4.84□□□□□ -1.63
USP41Q3LFD5 AC068724.3-201ENST00000625906 87 ntBASIC4.84□□□□□ -1.63
USP41Q3LFD5 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
USP41Q3LFD5 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
USP41Q3LFD5 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
USP41Q3LFD5 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
USP41Q3LFD5 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.83□□□□□ -1.64
USP41Q3LFD5 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
USP41Q3LFD5 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
USP41Q3LFD5 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
USP41Q3LFD5 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
USP41Q3LFD5 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.83□□□□□ -1.64
USP41Q3LFD5 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.83□□□□□ -1.64
USP41Q3LFD5 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
USP41Q3LFD5 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
USP41Q3LFD5 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP41Q3LFD5 RNU1-94P-201ENST00000362627 173 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 RNU6-98P-201ENST00000384173 107 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 SNORD65C-201ENST00000390962 71 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 DNAJC19P6-201ENST00000401853 280 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 RN7SKP247-201ENST00000411094 308 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 AC011933.1-201ENST00000413334 321 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.83□□□□□ -1.64
USP41Q3LFD5 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.83□□□□□ -1.64
USP41Q3LFD5 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.83□□□□□ -1.64
USP41Q3LFD5 CKS1BP6-201ENST00000424932 240 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
USP41Q3LFD5 AC092170.1-201ENST00000440211 356 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 MRPL48P1-201ENST00000445390 636 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 AC104651.2-201ENST00000447549 528 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.83□□□□□ -1.64
USP41Q3LFD5 RHEBP2-201ENST00000450289 600 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.83□□□□□ -1.64
USP41Q3LFD5 AC116533.1-201ENST00000459748 321 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 RN7SL98P-201ENST00000462271 300 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.83□□□□□ -1.64
USP41Q3LFD5 AC096571.1-202ENST00000506634 735 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.83□□□□□ -1.64
USP41Q3LFD5 NPM1P6-201ENST00000521088 871 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 HMGB1P1-201ENST00000522557 636 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
USP41Q3LFD5 POLR2KP1-201ENST00000553226 168 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.83□□□□□ -1.64
USP41Q3LFD5 ZNF971P-201ENST00000562068 1249 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.83□□□□□ -1.64
USP41Q3LFD5 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.83□□□□□ -1.64
USP41Q3LFD5 AC069366.1-201ENST00000583159 838 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.83□□□□□ -1.64
USP41Q3LFD5 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.83□□□□□ -1.64
USP41Q3LFD5 VN1R87P-201ENST00000596706 487 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 AC124856.1-201ENST00000600819 896 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 AP002906.1-201ENST00000603405 233 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 AC103792.1-201ENST00000603591 919 ntBASIC4.83□□□□□ -1.64
USP41Q3LFD5 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.83□□□□□ -1.64
USP41Q3LFD5 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
USP41Q3LFD5 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
USP41Q3LFD5 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.83□□□□□ -1.64
USP41Q3LFD5 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
USP41Q3LFD5 AC091046.3-201ENST00000631455 1574 ntBASIC4.82□□□□□ -1.64
USP41Q3LFD5 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
USP41Q3LFD5 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
USP41Q3LFD5 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
USP41Q3LFD5 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
USP41Q3LFD5 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
USP41Q3LFD5 RNU6-932P-201ENST00000391108 106 ntBASIC4.82□□□□□ -1.64
USP41Q3LFD5 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.82□□□□□ -1.64
USP41Q3LFD5 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.82□□□□□ -1.64
USP41Q3LFD5 AC048351.1-201ENST00000420064 602 ntBASIC4.82□□□□□ -1.64
USP41Q3LFD5 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.82□□□□□ -1.64
USP41Q3LFD5 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.82□□□□□ -1.64
USP41Q3LFD5 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.82□□□□□ -1.64
USP41Q3LFD5 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.82□□□□□ -1.64
USP41Q3LFD5 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.82□□□□□ -1.64
USP41Q3LFD5 PHBP16-201ENST00000446318 950 ntBASIC4.82□□□□□ -1.64
USP41Q3LFD5 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.82□□□□□ -1.64
USP41Q3LFD5 AC053481.1-201ENST00000467217 306 ntBASIC4.82□□□□□ -1.64
USP41Q3LFD5 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
USP41Q3LFD5 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms