Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 H2AFZP5-201ENST00000446960 382 ntBASIC5.06□□□□□ -1.6
UBE3AQ05086 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.06□□□□□ -1.6
UBE3AQ05086 AC020898.1-201ENST00000474167 787 ntBASIC5.06□□□□□ -1.6
UBE3AQ05086 AC015724.1-201ENST00000478577 156 ntBASIC5.06□□□□□ -1.6
UBE3AQ05086 AL049874.2-201ENST00000492636 288 ntBASIC5.06□□□□□ -1.6
UBE3AQ05086 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.06□□□□□ -1.6
UBE3AQ05086 RFPL4AP5-201ENST00000514977 504 ntBASIC5.06□□□□□ -1.6
UBE3AQ05086 snoZ278.1-201ENST00000517059 112 ntBASIC5.06□□□□□ -1.6
UBE3AQ05086 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UBE3AQ05086 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.06□□□□□ -1.6
UBE3AQ05086 MTND1P8-201ENST00000571424 950 ntBASIC5.06□□□□□ -1.6
UBE3AQ05086 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.06□□□□□ -1.6
UBE3AQ05086 AC023575.1-201ENST00000580510 358 ntBASIC5.06□□□□□ -1.6
UBE3AQ05086 MIR4472-2-201ENST00000582069 67 ntBASIC5.06□□□□□ -1.6
UBE3AQ05086 KPNA2P3-201ENST00000584190 848 ntBASIC5.06□□□□□ -1.6
UBE3AQ05086 NF1P5-201ENST00000588287 448 ntBASIC5.06□□□□□ -1.6
UBE3AQ05086 MTCO2P2-201ENST00000591258 225 ntBASIC5.06□□□□□ -1.6
UBE3AQ05086 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UBE3AQ05086 VN1R7P-201ENST00000619242 903 ntBASIC5.06□□□□□ -1.6
UBE3AQ05086 AP005019.3-201ENST00000620418 560 ntBASIC5.06□□□□□ -1.6
UBE3AQ05086 AC004232.3-201ENST00000622977 525 ntBASIC5.06□□□□□ -1.6
UBE3AQ05086 AP003072.4-201ENST00000624580 310 ntBASIC5.06□□□□□ -1.6
UBE3AQ05086 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
UBE3AQ05086 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
UBE3AQ05086 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
UBE3AQ05086 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
UBE3AQ05086 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
UBE3AQ05086 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
UBE3AQ05086 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
UBE3AQ05086 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UBE3AQ05086 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.05□□□□□ -1.6
UBE3AQ05086 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.05□□□□□ -1.6
UBE3AQ05086 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
UBE3AQ05086 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.05□□□□□ -1.6
UBE3AQ05086 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
UBE3AQ05086 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
UBE3AQ05086 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.05□□□□□ -1.6
UBE3AQ05086 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UBE3AQ05086 OR13Z1P-201ENST00000416141 834 ntBASIC5.05□□□□□ -1.6
UBE3AQ05086 QRSL1P2-201ENST00000418582 964 ntBASIC5.05□□□□□ -1.6
UBE3AQ05086 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.05□□□□□ -1.6
UBE3AQ05086 AL451139.1-201ENST00000434718 346 ntBASIC5.05□□□□□ -1.6
UBE3AQ05086 RPS26P40-201ENST00000435209 294 ntBASIC5.05□□□□□ -1.6
UBE3AQ05086 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.05□□□□□ -1.6
UBE3AQ05086 NAP1L1P3-201ENST00000462291 880 ntBASIC5.05□□□□□ -1.6
UBE3AQ05086 MTND6P6-201ENST00000478031 263 ntBASIC5.05□□□□□ -1.6
UBE3AQ05086 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.05□□□□□ -1.6
UBE3AQ05086 AP001781.1-201ENST00000530977 207 ntBASIC5.05□□□□□ -1.6
UBE3AQ05086 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.05□□□□□ -1.6
UBE3AQ05086 AL109766.1-201ENST00000555080 552 ntBASIC5.05□□□□□ -1.6
UBE3AQ05086 AC068831.4-201ENST00000556118 109 ntBASIC5.05□□□□□ -1.6
UBE3AQ05086 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.05□□□□□ -1.6
UBE3AQ05086 RPP40P2-201ENST00000603596 712 ntBASIC5.05□□□□□ -1.6
UBE3AQ05086 AL133338.2-201ENST00000604292 736 ntBASIC5.05□□□□□ -1.6
UBE3AQ05086 AC115286.1-201ENST00000604298 434 ntBASIC5.05□□□□□ -1.6
UBE3AQ05086 AC024060.1-201ENST00000607052 494 ntBASIC5.05□□□□□ -1.6
UBE3AQ05086 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.05□□□□□ -1.6
UBE3AQ05086 AL157392.4-201ENST00000609756 345 ntBASIC5.05□□□□□ -1.6
UBE3AQ05086 AC109454.4-201ENST00000623411 649 ntBASIC5.05□□□□□ -1.6
UBE3AQ05086 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.05□□□□□ -1.6
UBE3AQ05086 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.05□□□□□ -1.6
UBE3AQ05086 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.05□□□□□ -1.6
UBE3AQ05086 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
UBE3AQ05086 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
UBE3AQ05086 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
UBE3AQ05086 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UBE3AQ05086 AC073136.1-201ENST00000449426 2884 ntBASIC5.05□□□□□ -1.6
UBE3AQ05086 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
UBE3AQ05086 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
UBE3AQ05086 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UBE3AQ05086 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
UBE3AQ05086 BTBD10P1-201ENST00000549824 1352 ntBASIC5.04□□□□□ -1.6
UBE3AQ05086 AL450345.1-202ENST00000605741 3881 ntBASIC5.04□□□□□ -1.6
UBE3AQ05086 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UBE3AQ05086 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
UBE3AQ05086 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.04□□□□□ -1.6
UBE3AQ05086 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
UBE3AQ05086 AL512646.1-201ENST00000269395 1077 ntBASIC5.04□□□□□ -1.6
UBE3AQ05086 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
UBE3AQ05086 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
UBE3AQ05086 RNU6-224P-201ENST00000384055 107 ntBASIC5.04□□□□□ -1.6
UBE3AQ05086 SNORA57.1-201ENST00000391227 145 ntBASIC5.04□□□□□ -1.6
UBE3AQ05086 Z98745.1-201ENST00000402553 494 ntBASIC5.04□□□□□ -1.6
UBE3AQ05086 RN7SKP27-201ENST00000410684 333 ntBASIC5.04□□□□□ -1.6
UBE3AQ05086 RN7SKP97-201ENST00000410966 333 ntBASIC5.04□□□□□ -1.6
UBE3AQ05086 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.04□□□□□ -1.6
UBE3AQ05086 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.04□□□□□ -1.6
UBE3AQ05086 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.04□□□□□ -1.6
UBE3AQ05086 AL158073.1-201ENST00000426848 1104 ntBASIC5.04□□□□□ -1.6
UBE3AQ05086 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
UBE3AQ05086 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.04□□□□□ -1.6
UBE3AQ05086 AC092162.1-201ENST00000432828 434 ntBASIC5.04□□□□□ -1.6
UBE3AQ05086 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.04□□□□□ -1.6
UBE3AQ05086 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.04□□□□□ -1.6
UBE3AQ05086 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
UBE3AQ05086 OR52E3P-201ENST00000452083 936 ntBASIC5.04□□□□□ -1.6
UBE3AQ05086 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
UBE3AQ05086 RN7SL41P-201ENST00000476144 297 ntBASIC5.04□□□□□ -1.6
UBE3AQ05086 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.04□□□□□ -1.6
UBE3AQ05086 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms