Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.36□□□□□ -1.71
SEC61A1P61619 CASC19-222ENST00000641321 1173 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 LINC01739-205ENST00000641890 573 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.36□□□□□ -1.71
SEC61A1P61619 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SEC61A1P61619 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A1P61619 CASC19-221ENST00000641309 1382 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.36□□□□□ -1.71
SEC61A1P61619 CASC19-206ENST00000641028 1430 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A1P61619 AL606537.1-201ENST00000607258 2011 ntBASIC4.36□□□□□ -1.71
SEC61A1P61619 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.36□□□□□ -1.71
SEC61A1P61619 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A1P61619 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A1P61619 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A1P61619 AC107068.1-201ENST00000563286 4218 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SEC61A1P61619 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SEC61A1P61619 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
SEC61A1P61619 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SEC61A1P61619 AC138393.1-206ENST00000540997 1886 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.35□□□□□ -1.71
SEC61A1P61619 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SEC61A1P61619 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SEC61A1P61619 U3.3-201ENST00000362986 216 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 RN7SKP149-201ENST00000363008 344 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 RNU4-44P-201ENST00000363050 141 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 Y_RNA.192-201ENST00000363977 102 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 BMS1P3-201ENST00000372011 932 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 Y_RNA.465-201ENST00000384293 102 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 RNU6-549P-201ENST00000384433 107 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 RNU6-225P-201ENST00000384613 103 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SEC61A1P61619 AL021407.1-201ENST00000404531 386 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 AL390316.1-201ENST00000406279 553 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SEC61A1P61619 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.35□□□□□ -1.71
SEC61A1P61619 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.35□□□□□ -1.71
SEC61A1P61619 AC016769.2-201ENST00000414815 475 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.35□□□□□ -1.71
SEC61A1P61619 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.35□□□□□ -1.71
SEC61A1P61619 TIMM9P2-201ENST00000419324 266 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 AC006960.1-201ENST00000419980 153 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 AL365203.2-201ENST00000423444 196 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.35□□□□□ -1.71
SEC61A1P61619 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.35□□□□□ -1.71
SEC61A1P61619 MTND1P32-201ENST00000433043 938 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SEC61A1P61619 PSMD10P3-201ENST00000437000 448 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.35□□□□□ -1.71
SEC61A1P61619 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.35□□□□□ -1.71
SEC61A1P61619 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.35□□□□□ -1.71
SEC61A1P61619 AC091959.2-201ENST00000477363 321 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 AC108734.3-201ENST00000481241 1165 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.35□□□□□ -1.71
SEC61A1P61619 AC111193.1-201ENST00000504097 155 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 AC021146.3-201ENST00000511911 260 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 AL671862.1-201ENST00000515851 349 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.35□□□□□ -1.71
SEC61A1P61619 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.35□□□□□ -1.71
SEC61A1P61619 RPL23AP53-201ENST00000521854 457 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.35□□□□□ -1.71
SEC61A1P61619 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.35□□□□□ -1.71
SEC61A1P61619 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.35□□□□□ -1.71
SEC61A1P61619 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.35□□□□□ -1.71
SEC61A1P61619 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.35□□□□□ -1.71
SEC61A1P61619 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.35□□□□□ -1.71
SEC61A1P61619 AC044913.1-201ENST00000557200 430 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.35□□□□□ -1.71
SEC61A1P61619 AC119751.7-201ENST00000600494 245 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 AC125494.3-201ENST00000602759 455 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 AC008814.1-201ENST00000603797 406 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 AL031281.1-201ENST00000604049 488 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 AC124312.4-201ENST00000605533 310 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 AP000238.1-201ENST00000608759 426 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SEC61A1P61619 AC009163.6-201ENST00000612367 342 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 uc_338.18-201ENST00000615451 175 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 AC091931.1-201ENST00000623488 728 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SEC61A1P61619 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.35□□□□□ -1.71
SEC61A1P61619 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SEC61A1P61619 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SEC61A1P61619 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.35□□□□□ -1.71
SEC61A1P61619 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.35□□□□□ -1.71
SEC61A1P61619 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.35□□□□□ -1.71
SEC61A1P61619 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SEC61A1P61619 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.35□□□□□ -1.71
SEC61A1P61619 AL049737.1-201ENST00000413920 1403 ntBASIC4.35□□□□□ -1.71
SEC61A1P61619 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SEC61A1P61619 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SEC61A1P61619 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SEC61A1P61619 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.35□□□□□ -1.71
SEC61A1P61619 SEC63P2-201ENST00000503863 1939 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.34□□□□□ -1.71
SEC61A1P61619 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SEC61A1P61619 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SEC61A1P61619 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.34□□□□□ -1.71
SEC61A1P61619 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms