Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.99□□□□□ -1.77
CLDN6P56747 CYCSP10-201ENST00000417973 294 ntBASIC3.99□□□□□ -1.77
CLDN6P56747 AC048351.1-201ENST00000420064 602 ntBASIC3.99□□□□□ -1.77
CLDN6P56747 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.99□□□□□ -1.77
CLDN6P56747 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN6P56747 NOTCH2P1-201ENST00000443481 624 ntBASIC3.99□□□□□ -1.77
CLDN6P56747 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN6P56747 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.99□□□□□ -1.77
CLDN6P56747 CDH12P2-201ENST00000504393 298 ntBASIC3.99□□□□□ -1.77
CLDN6P56747 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.99□□□□□ -1.77
CLDN6P56747 AC110768.1-201ENST00000509222 400 ntBASIC3.99□□□□□ -1.77
CLDN6P56747 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.99□□□□□ -1.77
CLDN6P56747 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.99□□□□□ -1.77
CLDN6P56747 OR4A2P-201ENST00000527276 913 ntBASIC3.99□□□□□ -1.77
CLDN6P56747 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.99□□□□□ -1.77
CLDN6P56747 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.99□□□□□ -1.77
CLDN6P56747 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.99□□□□□ -1.77
CLDN6P56747 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.99□□□□□ -1.77
CLDN6P56747 AC233280.2-201ENST00000603917 1070 ntBASIC3.99□□□□□ -1.77
CLDN6P56747 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.99□□□□□ -1.77
CLDN6P56747 AC079298.2-201ENST00000623885 459 ntBASIC3.99□□□□□ -1.77
CLDN6P56747 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.99□□□□□ -1.77
CLDN6P56747 AC087190.4-201ENST00000574616 8334 ntBASIC3.99□□□□□ -1.77
CLDN6P56747 AC006971.1-201ENST00000407916 4486 ntBASIC3.99□□□□□ -1.77
CLDN6P56747 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN6P56747 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.99□□□□□ -1.77
CLDN6P56747 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN6P56747 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
CLDN6P56747 USP9YP4-201ENST00000424401 1745 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 AC114546.3-201ENST00000623582 1734 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.98□□□□□ -1.77
CLDN6P56747 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN6P56747 AC106871.1-201ENST00000568324 3102 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 AC009229.4-201ENST00000623854 1947 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN6P56747 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN6P56747 RNU6-146P-201ENST00000384602 108 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 MIR30B-201ENST00000384850 88 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 AC008280.1-201ENST00000418851 412 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 OR5BE1P-201ENST00000425977 939 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 RPS4XP4-201ENST00000443195 763 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 GEMIN8P3-201ENST00000445417 720 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.98□□□□□ -1.77
CLDN6P56747 RPS6P2-201ENST00000454208 705 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 AC012158.1-204ENST00000483430 465 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.98□□□□□ -1.77
CLDN6P56747 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.98□□□□□ -1.77
CLDN6P56747 AC090151.1-201ENST00000520784 730 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.98□□□□□ -1.77
CLDN6P56747 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.98□□□□□ -1.77
CLDN6P56747 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.98□□□□□ -1.77
CLDN6P56747 AL121834.1-201ENST00000572284 509 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.98□□□□□ -1.77
CLDN6P56747 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.98□□□□□ -1.77
CLDN6P56747 MTCO2P22-201ENST00000603246 681 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 AC007179.3-201ENST00000604976 235 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 AC010201.1-201ENST00000605051 540 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 AL353726.1-201ENST00000614041 1000 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 FP236240.3-201ENST00000623061 327 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.98□□□□□ -1.77
CLDN6P56747 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.98□□□□□ -1.77
CLDN6P56747 BMS1P21-201ENST00000634565 365 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 OR5BE1P-202ENST00000641168 1176 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 ZNF285B-201ENST00000561698 1767 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
CLDN6P56747 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN6P56747 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CLDN6P56747 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN6P56747 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
CLDN6P56747 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN6P56747 AC116667.1-201ENST00000604855 2072 ntBASIC3.98□□□□□ -1.77
CLDN6P56747 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CLDN6P56747 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN6P56747 AL445437.1-201ENST00000623157 3087 ntBASIC3.97□□□□□ -1.77
CLDN6P56747 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.97□□□□□ -1.77
CLDN6P56747 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN6P56747 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CLDN6P56747 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN6P56747 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN6P56747 SNORD66.1-201ENST00000391230 76 ntBASIC3.97□□□□□ -1.77
CLDN6P56747 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN6P56747 AL139039.2-201ENST00000407436 479 ntBASIC3.97□□□□□ -1.77
CLDN6P56747 RN7SKP167-201ENST00000411047 285 ntBASIC3.97□□□□□ -1.77
CLDN6P56747 MTCO3P21-201ENST00000430791 643 ntBASIC3.97□□□□□ -1.77
CLDN6P56747 RPL23AP25-201ENST00000430973 463 ntBASIC3.97□□□□□ -1.77
CLDN6P56747 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.97□□□□□ -1.77
CLDN6P56747 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN6P56747 RPL23AP46-201ENST00000438548 490 ntBASIC3.97□□□□□ -1.77
CLDN6P56747 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN6P56747 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.97□□□□□ -1.77
CLDN6P56747 PSMC1P13-201ENST00000458195 985 ntBASIC3.97□□□□□ -1.77
CLDN6P56747 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN6P56747 RNA5SP246-201ENST00000458909 119 ntBASIC3.97□□□□□ -1.77
CLDN6P56747 HMGN1P8-201ENST00000463578 288 ntBASIC3.97□□□□□ -1.77
CLDN6P56747 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.97□□□□□ -1.77
CLDN6P56747 SCARNA13-201ENST00000516672 275 ntBASIC3.97□□□□□ -1.77
CLDN6P56747 IGKV2-23-201ENST00000518729 323 ntBASIC3.97□□□□□ -1.77
CLDN6P56747 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms