Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 PHBP16-201ENST00000446318 950 ntBASIC2.93□□□□□ -1.94
FOXA3P55318 AC005229.2-201ENST00000456995 399 ntBASIC2.93□□□□□ -1.94
FOXA3P55318 RPS3AP41-201ENST00000462701 778 ntBASIC2.93□□□□□ -1.94
FOXA3P55318 AP000873.1-201ENST00000463987 400 ntBASIC2.93□□□□□ -1.94
FOXA3P55318 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC2.93□□□□□ -1.94
FOXA3P55318 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC2.93□□□□□ -1.94
FOXA3P55318 AC078785.3-201ENST00000476607 425 ntBASIC2.93□□□□□ -1.94
FOXA3P55318 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.93□□□□□ -1.94
FOXA3P55318 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
FOXA3P55318 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC2.93□□□□□ -1.94
FOXA3P55318 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
FOXA3P55318 RNA5SP49-201ENST00000516450 115 ntBASIC2.93□□□□□ -1.94
FOXA3P55318 RNU6-347P-201ENST00000516658 105 ntBASIC2.93□□□□□ -1.94
FOXA3P55318 AL139174.1-201ENST00000531489 886 ntBASIC2.93□□□□□ -1.94
FOXA3P55318 TRAV8-5-201ENST00000537369 341 ntBASIC2.93□□□□□ -1.94
FOXA3P55318 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC2.93□□□□□ -1.94
FOXA3P55318 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.93□□□□□ -1.94
FOXA3P55318 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC2.93□□□□□ -1.94
FOXA3P55318 AC025627.2-201ENST00000576220 160 ntBASIC2.93□□□□□ -1.94
FOXA3P55318 MIR4425-201ENST00000580572 84 ntBASIC2.93□□□□□ -1.94
FOXA3P55318 MIR5684-201ENST00000585074 65 ntBASIC2.93□□□□□ -1.94
FOXA3P55318 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.93□□□□□ -1.94
FOXA3P55318 BMS1P7-201ENST00000602440 1052 ntBASIC2.93□□□□□ -1.94
FOXA3P55318 AC007687.1-201ENST00000602704 304 ntBASIC2.93□□□□□ -1.94
FOXA3P55318 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC2.93□□□□□ -1.94
FOXA3P55318 AL592295.2-201ENST00000612578 206 ntBASIC2.93□□□□□ -1.94
FOXA3P55318 AC008121.2-201ENST00000614647 523 ntBASIC2.93□□□□□ -1.94
FOXA3P55318 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
FOXA3P55318 UOX-205ENST00000640983 544 ntTSL 4 BASIC2.93□□□□□ -1.94
FOXA3P55318 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
FOXA3P55318 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
FOXA3P55318 AC025125.1-201ENST00000624743 1922 ntBASIC2.93□□□□□ -1.94
FOXA3P55318 USP8P1-201ENST00000494673 3183 ntBASIC2.93□□□□□ -1.94
FOXA3P55318 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
FOXA3P55318 AC017002.4-201ENST00000604721 1525 ntBASIC2.93□□□□□ -1.94
FOXA3P55318 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC2.93□□□□□ -1.94
FOXA3P55318 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
FOXA3P55318 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
FOXA3P55318 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
FOXA3P55318 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
FOXA3P55318 AC138393.1-206ENST00000540997 1886 ntBASIC2.92□□□□□ -1.94
FOXA3P55318 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
FOXA3P55318 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
FOXA3P55318 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
FOXA3P55318 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
FOXA3P55318 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
FOXA3P55318 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
FOXA3P55318 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
FOXA3P55318 RN7SKP103-201ENST00000363848 320 ntBASIC2.92□□□□□ -1.94
FOXA3P55318 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
FOXA3P55318 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
FOXA3P55318 AL645927.1-201ENST00000396783 406 ntBASIC2.92□□□□□ -1.94
FOXA3P55318 RN7SKP285-201ENST00000410137 318 ntBASIC2.92□□□□□ -1.94
FOXA3P55318 AC006065.1-201ENST00000422539 802 ntBASIC2.92□□□□□ -1.94
FOXA3P55318 AC093084.1-201ENST00000424233 687 ntBASIC2.92□□□□□ -1.94
FOXA3P55318 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC2.92□□□□□ -1.94
FOXA3P55318 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
FOXA3P55318 USP9YP31-201ENST00000431405 881 ntBASIC2.92□□□□□ -1.94
FOXA3P55318 AC011998.1-201ENST00000433403 117 ntBASIC2.92□□□□□ -1.94
FOXA3P55318 RPL12P3-201ENST00000440080 396 ntBASIC2.92□□□□□ -1.94
FOXA3P55318 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC2.92□□□□□ -1.94
FOXA3P55318 RPS17P13-201ENST00000448974 407 ntBASIC2.92□□□□□ -1.94
FOXA3P55318 CFTRP1-201ENST00000456646 183 ntBASIC2.92□□□□□ -1.94
FOXA3P55318 RN7SL98P-201ENST00000462271 300 ntBASIC2.92□□□□□ -1.94
FOXA3P55318 RPL23AP73-201ENST00000492507 471 ntBASIC2.92□□□□□ -1.94
FOXA3P55318 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
FOXA3P55318 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC2.92□□□□□ -1.94
FOXA3P55318 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.92□□□□□ -1.94
FOXA3P55318 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
FOXA3P55318 RN7SKP60-201ENST00000516985 239 ntBASIC2.92□□□□□ -1.94
FOXA3P55318 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC2.92□□□□□ -1.94
FOXA3P55318 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
FOXA3P55318 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.92□□□□□ -1.94
FOXA3P55318 IGHVIII-67-4-201ENST00000524281 296 ntBASIC2.92□□□□□ -1.94
FOXA3P55318 OR8G5-201ENST00000524943 1041 ntBASIC2.92□□□□□ -1.94
FOXA3P55318 APPL2-203ENST00000546731 684 ntTSL 2 BASIC2.92□□□□□ -1.94
FOXA3P55318 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC2.92□□□□□ -1.94
FOXA3P55318 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC2.92□□□□□ -1.94
FOXA3P55318 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC2.92□□□□□ -1.94
FOXA3P55318 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.92□□□□□ -1.94
FOXA3P55318 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC2.92□□□□□ -1.94
FOXA3P55318 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC2.92□□□□□ -1.94
FOXA3P55318 MIR4738-201ENST00000579134 87 ntBASIC2.92□□□□□ -1.94
FOXA3P55318 MIR5047-201ENST00000579212 100 ntBASIC2.92□□□□□ -1.94
FOXA3P55318 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC2.92□□□□□ -1.94
FOXA3P55318 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.92□□□□□ -1.94
FOXA3P55318 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC2.92□□□□□ -1.94
FOXA3P55318 AC090510.2-201ENST00000617465 629 ntBASIC2.92□□□□□ -1.94
FOXA3P55318 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
FOXA3P55318 AL592148.3-201ENST00000608771 2646 ntBASIC2.92□□□□□ -1.94
FOXA3P55318 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.92□□□□□ -1.94
FOXA3P55318 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
FOXA3P55318 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
FOXA3P55318 AC058791.1-201ENST00000608412 3198 ntBASIC2.92□□□□□ -1.94
FOXA3P55318 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
FOXA3P55318 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
FOXA3P55318 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
FOXA3P55318 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
FOXA3P55318 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
FOXA3P55318 SNORA51.1-201ENST00000363243 140 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms