Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH11P55287 AC098935.2-201ENST00000604222 466 ntBASIC4.25□□□□□ -1.73
CDH11P55287 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH11P55287 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.25□□□□□ -1.73
CDH11P55287 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH11P55287 AC123767.1-202ENST00000620407 817 ntBASIC4.25□□□□□ -1.73
CDH11P55287 AP000770.2-201ENST00000623694 100 ntBASIC4.25□□□□□ -1.73
CDH11P55287 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH11P55287 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CDH11P55287 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH11P55287 AC010300.1-201ENST00000600671 5134 ntBASIC4.25□□□□□ -1.73
CDH11P55287 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.25□□□□□ -1.73
CDH11P55287 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDH11P55287 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
CDH11P55287 AL355852.1-201ENST00000454081 1771 ntBASIC4.25□□□□□ -1.73
CDH11P55287 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDH11P55287 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDH11P55287 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
CDH11P55287 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDH11P55287 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDH11P55287 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.24□□□□□ -1.73
CDH11P55287 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.24□□□□□ -1.73
CDH11P55287 AC091046.3-201ENST00000631455 1574 ntBASIC4.24□□□□□ -1.73
CDH11P55287 SNORA56-201ENST00000383966 129 ntBASIC4.24□□□□□ -1.73
CDH11P55287 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDH11P55287 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDH11P55287 RPS4XP9-201ENST00000405151 780 ntBASIC4.24□□□□□ -1.73
CDH11P55287 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.24□□□□□ -1.73
CDH11P55287 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH11P55287 AC073136.2-201ENST00000417282 849 ntBASIC4.24□□□□□ -1.73
CDH11P55287 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.24□□□□□ -1.73
CDH11P55287 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH11P55287 AC245028.1-201ENST00000423259 256 ntBASIC4.24□□□□□ -1.73
CDH11P55287 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH11P55287 RPS26P30-201ENST00000443431 335 ntBASIC4.24□□□□□ -1.73
CDH11P55287 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH11P55287 PTMAP3-201ENST00000447474 330 ntBASIC4.24□□□□□ -1.73
CDH11P55287 AC010733.1-201ENST00000451515 401 ntBASIC4.24□□□□□ -1.73
CDH11P55287 AL161747.1-201ENST00000480068 358 ntBASIC4.24□□□□□ -1.73
CDH11P55287 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.24□□□□□ -1.73
CDH11P55287 AC104687.1-201ENST00000485829 412 ntBASIC4.24□□□□□ -1.73
CDH11P55287 AC010627.1-201ENST00000503819 1294 ntBASIC4.24□□□□□ -1.73
CDH11P55287 AC111193.1-201ENST00000504097 155 ntBASIC4.24□□□□□ -1.73
CDH11P55287 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.24□□□□□ -1.73
CDH11P55287 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH11P55287 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.24□□□□□ -1.73
CDH11P55287 snoU109.6-201ENST00000516831 118 ntBASIC4.24□□□□□ -1.73
CDH11P55287 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH11P55287 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH11P55287 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.24□□□□□ -1.73
CDH11P55287 OR8K4P-201ENST00000534608 872 ntBASIC4.24□□□□□ -1.73
CDH11P55287 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH11P55287 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH11P55287 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.24□□□□□ -1.73
CDH11P55287 AC023824.3-201ENST00000569003 562 ntBASIC4.24□□□□□ -1.73
CDH11P55287 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.24□□□□□ -1.73
CDH11P55287 SLC25A36P1-201ENST00000590111 465 ntBASIC4.24□□□□□ -1.73
CDH11P55287 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH11P55287 AC091979.2-201ENST00000607514 214 ntBASIC4.24□□□□□ -1.73
CDH11P55287 AC109809.1-201ENST00000619665 545 ntBASIC4.24□□□□□ -1.73
CDH11P55287 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDH11P55287 AL109659.3-201ENST00000624985 950 ntBASIC4.24□□□□□ -1.73
CDH11P55287 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH11P55287 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDH11P55287 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDH11P55287 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDH11P55287 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDH11P55287 AC100871.1-201ENST00000507871 1456 ntBASIC4.24□□□□□ -1.73
CDH11P55287 AC092079.1-201ENST00000558620 1985 ntBASIC4.23□□□□□ -1.73
CDH11P55287 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDH11P55287 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDH11P55287 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.23□□□□□ -1.73
CDH11P55287 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDH11P55287 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDH11P55287 RNVU1-6-201ENST00000364688 164 ntBASIC4.23□□□□□ -1.73
CDH11P55287 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDH11P55287 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.23□□□□□ -1.73
CDH11P55287 AL590762.2-201ENST00000395798 571 ntBASIC4.23□□□□□ -1.73
CDH11P55287 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDH11P55287 AL121834.1-202ENST00000404494 277 ntBASIC4.23□□□□□ -1.73
CDH11P55287 RPS16P5-201ENST00000406501 404 ntBASIC4.23□□□□□ -1.73
CDH11P55287 OR51B3P-201ENST00000412287 913 ntBASIC4.23□□□□□ -1.73
CDH11P55287 TAF13P2-201ENST00000416876 286 ntBASIC4.23□□□□□ -1.73
CDH11P55287 AL807761.1-201ENST00000417622 171 ntBASIC4.23□□□□□ -1.73
CDH11P55287 MTND4P3-201ENST00000417829 541 ntBASIC4.23□□□□□ -1.73
CDH11P55287 AC048351.1-201ENST00000420064 602 ntBASIC4.23□□□□□ -1.73
CDH11P55287 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.23□□□□□ -1.73
CDH11P55287 HMGB1P45-201ENST00000435986 653 ntBASIC4.23□□□□□ -1.73
CDH11P55287 ELOCP11-201ENST00000436690 332 ntBASIC4.23□□□□□ -1.73
CDH11P55287 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.23□□□□□ -1.73
CDH11P55287 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.23□□□□□ -1.73
CDH11P55287 AL138878.2-201ENST00000440581 1241 ntBASIC4.23□□□□□ -1.73
CDH11P55287 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.23□□□□□ -1.73
CDH11P55287 ELOCP16-201ENST00000444494 332 ntBASIC4.23□□□□□ -1.73
CDH11P55287 AC005002.1-201ENST00000447458 540 ntBASIC4.23□□□□□ -1.73
CDH11P55287 AC073264.2-201ENST00000448886 166 ntBASIC4.23□□□□□ -1.73
CDH11P55287 TPT1P13-201ENST00000449760 499 ntBASIC4.23□□□□□ -1.73
CDH11P55287 AURKAPS2-201ENST00000454983 333 ntBASIC4.23□□□□□ -1.73
CDH11P55287 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.23□□□□□ -1.73
CDH11P55287 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms