Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 MIR6075-201ENST00000620782 95 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
LIMK1P53667 MIR492-201ENST00000638676 116 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 AC006042.3-201ENST00000454684 1469 ntBASIC4.66□□□□□ -1.66
LIMK1P53667 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.66□□□□□ -1.66
LIMK1P53667 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LIMK1P53667 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LIMK1P53667 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LIMK1P53667 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
LIMK1P53667 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LIMK1P53667 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.65□□□□□ -1.66
LIMK1P53667 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.65□□□□□ -1.66
LIMK1P53667 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
LIMK1P53667 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LIMK1P53667 RNA5SP27-201ENST00000363839 119 ntBASIC4.65□□□□□ -1.67
LIMK1P53667 U3.15-201ENST00000365398 212 ntBASIC4.65□□□□□ -1.67
LIMK1P53667 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
LIMK1P53667 HMGB3P18-201ENST00000406327 590 ntBASIC4.65□□□□□ -1.67
LIMK1P53667 SNORA11.1-201ENST00000408133 129 ntBASIC4.65□□□□□ -1.67
LIMK1P53667 RNA5SP239-201ENST00000410218 129 ntBASIC4.65□□□□□ -1.67
LIMK1P53667 AC114814.2-201ENST00000419195 485 ntBASIC4.65□□□□□ -1.67
LIMK1P53667 EIF4A1P1-201ENST00000420241 934 ntBASIC4.65□□□□□ -1.67
LIMK1P53667 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.65□□□□□ -1.67
LIMK1P53667 AC093422.3-201ENST00000428506 305 ntBASIC4.65□□□□□ -1.67
LIMK1P53667 ETF1P3-201ENST00000430422 1160 ntBASIC4.65□□□□□ -1.67
LIMK1P53667 RPS29P17-201ENST00000430795 166 ntBASIC4.65□□□□□ -1.67
LIMK1P53667 MRPL50P1-201ENST00000431951 384 ntBASIC4.65□□□□□ -1.67
LIMK1P53667 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.65□□□□□ -1.67
LIMK1P53667 ACTR3P2-201ENST00000439585 1257 ntBASIC4.65□□□□□ -1.67
LIMK1P53667 VN1R34P-201ENST00000447387 883 ntBASIC4.65□□□□□ -1.67
LIMK1P53667 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.65□□□□□ -1.67
LIMK1P53667 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.65□□□□□ -1.67
LIMK1P53667 AC008379.1-201ENST00000463655 464 ntBASIC4.65□□□□□ -1.67
LIMK1P53667 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.65□□□□□ -1.67
LIMK1P53667 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.65□□□□□ -1.67
LIMK1P53667 AC020890.1-201ENST00000491837 504 ntBASIC4.65□□□□□ -1.67
LIMK1P53667 TPT1P3-201ENST00000492841 512 ntBASIC4.65□□□□□ -1.67
LIMK1P53667 RN7SL810P-201ENST00000493031 276 ntBASIC4.65□□□□□ -1.67
LIMK1P53667 HMGB1P21-201ENST00000502313 581 ntBASIC4.65□□□□□ -1.67
LIMK1P53667 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
LIMK1P53667 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LIMK1P53667 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.65□□□□□ -1.67
LIMK1P53667 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.65□□□□□ -1.67
LIMK1P53667 OR8R1P-201ENST00000543943 764 ntBASIC4.65□□□□□ -1.67
LIMK1P53667 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.65□□□□□ -1.67
LIMK1P53667 IPO5P1-202ENST00000600039 287 ntBASIC4.65□□□□□ -1.67
LIMK1P53667 AL121932.1-201ENST00000605542 214 ntBASIC4.65□□□□□ -1.67
LIMK1P53667 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LIMK1P53667 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
LIMK1P53667 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LIMK1P53667 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
LIMK1P53667 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
LIMK1P53667 MTND4P31-201ENST00000425607 1343 ntBASIC4.65□□□□□ -1.67
LIMK1P53667 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
LIMK1P53667 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.65□□□□□ -1.67
LIMK1P53667 AC138393.1-206ENST00000540997 1886 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
LIMK1P53667 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LIMK1P53667 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LIMK1P53667 ZNF137P-201ENST00000456718 1920 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.64□□□□□ -1.67
LIMK1P53667 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LIMK1P53667 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.64□□□□□ -1.67
LIMK1P53667 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
LIMK1P53667 SNORA71.2-201ENST00000364941 134 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LIMK1P53667 AL590762.2-201ENST00000395798 571 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 AP002784.2-201ENST00000397300 549 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 MIR1303-201ENST00000408625 86 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 AC069282.1-201ENST00000411911 526 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 NRBF2P2-201ENST00000413087 861 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.64□□□□□ -1.67
LIMK1P53667 AC140479.3-201ENST00000418944 1126 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 LINC00993-201ENST00000420453 540 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 AL450023.3-201ENST00000440592 271 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.64□□□□□ -1.67
LIMK1P53667 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.64□□□□□ -1.67
LIMK1P53667 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.64□□□□□ -1.67
LIMK1P53667 MTND2P39-201ENST00000457230 764 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.64□□□□□ -1.67
LIMK1P53667 AC022795.1-201ENST00000473808 480 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.64□□□□□ -1.67
LIMK1P53667 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.64□□□□□ -1.67
LIMK1P53667 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.64□□□□□ -1.67
LIMK1P53667 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.64□□□□□ -1.67
LIMK1P53667 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LIMK1P53667 AP003717.3-201ENST00000544832 1180 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.64□□□□□ -1.67
LIMK1P53667 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.64□□□□□ -1.67
LIMK1P53667 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.64□□□□□ -1.67
LIMK1P53667 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.64□□□□□ -1.67
LIMK1P53667 AC106734.1-201ENST00000568646 663 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 AC104072.1-201ENST00000568817 668 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 RN7SL652P-201ENST00000577769 300 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LIMK1P53667 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.64□□□□□ -1.67
LIMK1P53667 AC083899.3-201ENST00000603413 594 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 AL133338.2-201ENST00000604292 736 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 AC010680.4-201ENST00000605334 543 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 ARF4P1-201ENST00000605447 541 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms