Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 RSL24D1P3-201ENST00000449255 495 ntBASIC5.13□□□□□ -1.59
COPB1P53618 AURKAPS2-201ENST00000454983 333 ntBASIC5.13□□□□□ -1.59
COPB1P53618 TPTE2P5-203ENST00000458118 728 ntBASIC5.13□□□□□ -1.59
COPB1P53618 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.13□□□□□ -1.59
COPB1P53618 AC126121.1-201ENST00000482313 553 ntBASIC5.13□□□□□ -1.59
COPB1P53618 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.13□□□□□ -1.59
COPB1P53618 AC025164.1-201ENST00000496249 478 ntBASIC5.13□□□□□ -1.59
COPB1P53618 ARL4AP1-201ENST00000503220 705 ntBASIC5.13□□□□□ -1.59
COPB1P53618 AC091860.1-201ENST00000505723 432 ntBASIC5.13□□□□□ -1.59
COPB1P53618 GAPDHP56-201ENST00000506031 988 ntBASIC5.13□□□□□ -1.59
COPB1P53618 AC118282.2-201ENST00000508739 374 ntBASIC5.13□□□□□ -1.59
COPB1P53618 MRPS33P3-201ENST00000513456 322 ntBASIC5.13□□□□□ -1.59
COPB1P53618 TCP11X3P-202ENST00000514289 1254 ntBASIC5.13□□□□□ -1.59
COPB1P53618 RFPL4AP5-201ENST00000514977 504 ntBASIC5.13□□□□□ -1.59
COPB1P53618 PRELID3BP4-201ENST00000515476 571 ntBASIC5.13□□□□□ -1.59
COPB1P53618 RNU1-6P-201ENST00000516290 144 ntBASIC5.13□□□□□ -1.59
COPB1P53618 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.13□□□□□ -1.59
COPB1P53618 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.13□□□□□ -1.59
COPB1P53618 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.13□□□□□ -1.59
COPB1P53618 AC109635.6-201ENST00000525487 1113 ntBASIC5.13□□□□□ -1.59
COPB1P53618 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.13□□□□□ -1.59
COPB1P53618 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COPB1P53618 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.13□□□□□ -1.59
COPB1P53618 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.13□□□□□ -1.59
COPB1P53618 AC095057.3-201ENST00000567102 1157 ntBASIC5.13□□□□□ -1.59
COPB1P53618 AP001269.3-201ENST00000588718 329 ntBASIC5.13□□□□□ -1.59
COPB1P53618 VN1R83P-201ENST00000595685 445 ntBASIC5.13□□□□□ -1.59
COPB1P53618 AC110760.3-201ENST00000598794 467 ntBASIC5.13□□□□□ -1.59
COPB1P53618 AC018638.7-201ENST00000605836 1114 ntBASIC5.13□□□□□ -1.59
COPB1P53618 AC012557.2-201ENST00000605919 418 ntBASIC5.13□□□□□ -1.59
COPB1P53618 AC091979.2-201ENST00000607514 214 ntBASIC5.13□□□□□ -1.59
COPB1P53618 AL392048.1-201ENST00000613946 534 ntBASIC5.13□□□□□ -1.59
COPB1P53618 AC100827.5-201ENST00000615883 426 ntBASIC5.13□□□□□ -1.59
COPB1P53618 VN1R7P-201ENST00000619242 903 ntBASIC5.13□□□□□ -1.59
COPB1P53618 AC067852.7-201ENST00000623270 535 ntBASIC5.13□□□□□ -1.59
COPB1P53618 AP000676.3-201ENST00000623299 569 ntBASIC5.13□□□□□ -1.59
COPB1P53618 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.13□□□□□ -1.59
COPB1P53618 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COPB1P53618 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COPB1P53618 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COPB1P53618 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
COPB1P53618 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
COPB1P53618 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COPB1P53618 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.13□□□□□ -1.59
COPB1P53618 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.13□□□□□ -1.59
COPB1P53618 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
COPB1P53618 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
COPB1P53618 AL442639.1-201ENST00000625030 1899 ntBASIC5.12□□□□□ -1.59
COPB1P53618 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COPB1P53618 RNU4-4P-201ENST00000364588 130 ntBASIC5.12□□□□□ -1.59
COPB1P53618 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COPB1P53618 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
COPB1P53618 AL356131.1-201ENST00000405826 414 ntBASIC5.12□□□□□ -1.59
COPB1P53618 AC013404.1-201ENST00000413068 249 ntBASIC5.12□□□□□ -1.59
COPB1P53618 MTND4P22-201ENST00000413116 1169 ntBASIC5.12□□□□□ -1.59
COPB1P53618 VTA1P1-201ENST00000414044 866 ntBASIC5.12□□□□□ -1.59
COPB1P53618 TCEA1P4-201ENST00000415066 844 ntBASIC5.12□□□□□ -1.59
COPB1P53618 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.12□□□□□ -1.59
COPB1P53618 RPL23AP4-201ENST00000427757 463 ntBASIC5.12□□□□□ -1.59
COPB1P53618 OR2B7P-201ENST00000429302 934 ntBASIC5.12□□□□□ -1.59
COPB1P53618 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COPB1P53618 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
COPB1P53618 AC092170.1-201ENST00000440211 356 ntBASIC5.12□□□□□ -1.59
COPB1P53618 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.12□□□□□ -1.59
COPB1P53618 AL591623.2-201ENST00000449978 222 ntBASIC5.12□□□□□ -1.59
COPB1P53618 AL133217.1-201ENST00000450980 425 ntBASIC5.12□□□□□ -1.59
COPB1P53618 AC002553.2-201ENST00000453217 340 ntBASIC5.12□□□□□ -1.59
COPB1P53618 AC005008.1-201ENST00000456151 612 ntBASIC5.12□□□□□ -1.59
COPB1P53618 RPL35AP28-201ENST00000459730 331 ntBASIC5.12□□□□□ -1.59
COPB1P53618 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.12□□□□□ -1.59
COPB1P53618 AC069528.1-202ENST00000482888 637 ntBASIC5.12□□□□□ -1.59
COPB1P53618 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.12□□□□□ -1.59
COPB1P53618 AC108043.1-201ENST00000512696 574 ntBASIC5.12□□□□□ -1.59
COPB1P53618 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.12□□□□□ -1.59
COPB1P53618 MTCO1P47-201ENST00000523889 1271 ntBASIC5.12□□□□□ -1.59
COPB1P53618 AP001922.4-201ENST00000526967 290 ntBASIC5.12□□□□□ -1.59
COPB1P53618 MTND2P26-201ENST00000528255 1029 ntBASIC5.12□□□□□ -1.59
COPB1P53618 HIGD1AP5-201ENST00000529959 259 ntBASIC5.12□□□□□ -1.59
COPB1P53618 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.12□□□□□ -1.59
COPB1P53618 AC008126.1-201ENST00000549019 480 ntBASIC5.12□□□□□ -1.59
COPB1P53618 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.12□□□□□ -1.59
COPB1P53618 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.12□□□□□ -1.59
COPB1P53618 AC027104.1-201ENST00000563702 681 ntBASIC5.12□□□□□ -1.59
COPB1P53618 ATP5F1P7-201ENST00000567330 760 ntBASIC5.12□□□□□ -1.59
COPB1P53618 AL354943.1-201ENST00000572103 781 ntBASIC5.12□□□□□ -1.59
COPB1P53618 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COPB1P53618 AP005136.1-201ENST00000579765 429 ntBASIC5.12□□□□□ -1.59
COPB1P53618 AL133507.1-201ENST00000605269 557 ntBASIC5.12□□□□□ -1.59
COPB1P53618 AC131159.1-201ENST00000621854 213 ntBASIC5.12□□□□□ -1.59
COPB1P53618 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.12□□□□□ -1.59
COPB1P53618 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.12□□□□□ -1.59
COPB1P53618 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.12□□□□□ -1.59
COPB1P53618 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.12□□□□□ -1.59
COPB1P53618 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COPB1P53618 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
COPB1P53618 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COPB1P53618 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.12□□□□□ -1.59
COPB1P53618 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COPB1P53618 AC073055.1-201ENST00000456901 1621 ntBASIC5.12□□□□□ -1.59
COPB1P53618 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms