Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 DUXAP11-201ENST00000603858 526 ntBASIC5.94□□□□□ -1.46
MRE11P49959 BNIP3P11-201ENST00000603878 563 ntBASIC5.94□□□□□ -1.46
MRE11P49959 AC106791.2-201ENST00000604680 391 ntBASIC5.94□□□□□ -1.46
MRE11P49959 IMMP1LP1-201ENST00000605170 488 ntBASIC5.94□□□□□ -1.46
MRE11P49959 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.94□□□□□ -1.46
MRE11P49959 AC013468.1-201ENST00000608680 598 ntBASIC5.94□□□□□ -1.46
MRE11P49959 AC126915.2-201ENST00000610957 190 ntBASIC5.94□□□□□ -1.46
MRE11P49959 AC122133.1-201ENST00000613964 233 ntBASIC5.94□□□□□ -1.46
MRE11P49959 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.94□□□□□ -1.46
MRE11P49959 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.94□□□□□ -1.46
MRE11P49959 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.94□□□□□ -1.46
MRE11P49959 OR5BE1P-202ENST00000641168 1176 ntBASIC5.94□□□□□ -1.46
MRE11P49959 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MRE11P49959 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MRE11P49959 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
MRE11P49959 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
MRE11P49959 AC006042.3-201ENST00000454684 1469 ntBASIC5.94□□□□□ -1.46
MRE11P49959 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MRE11P49959 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MRE11P49959 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
MRE11P49959 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MRE11P49959 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MRE11P49959 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
MRE11P49959 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
MRE11P49959 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.94□□□□□ -1.46
MRE11P49959 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
MRE11P49959 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
MRE11P49959 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
MRE11P49959 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MRE11P49959 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MRE11P49959 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
MRE11P49959 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.93□□□□□ -1.46
MRE11P49959 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
MRE11P49959 RNU6-553P-201ENST00000364047 96 ntBASIC5.93□□□□□ -1.46
MRE11P49959 AC002524.1-201ENST00000411687 547 ntBASIC5.93□□□□□ -1.46
MRE11P49959 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.93□□□□□ -1.46
MRE11P49959 AC113412.1-201ENST00000425840 504 ntBASIC5.93□□□□□ -1.46
MRE11P49959 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.93□□□□□ -1.46
MRE11P49959 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.93□□□□□ -1.46
MRE11P49959 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.93□□□□□ -1.46
MRE11P49959 MTND1P1-201ENST00000445453 368 ntBASIC5.93□□□□□ -1.46
MRE11P49959 TDGF1P1-201ENST00000445734 527 ntBASIC5.93□□□□□ -1.46
MRE11P49959 RPS20P4-201ENST00000461659 355 ntBASIC5.93□□□□□ -1.46
MRE11P49959 RPL21P6-201ENST00000479171 504 ntBASIC5.93□□□□□ -1.46
MRE11P49959 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.93□□□□□ -1.46
MRE11P49959 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.93□□□□□ -1.46
MRE11P49959 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.93□□□□□ -1.46
MRE11P49959 AC105185.1-201ENST00000518705 535 ntBASIC5.93□□□□□ -1.46
MRE11P49959 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.93□□□□□ -1.46
MRE11P49959 HMGB1P42-201ENST00000532126 553 ntBASIC5.93□□□□□ -1.46
MRE11P49959 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC5.93□□□□□ -1.46
MRE11P49959 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.93□□□□□ -1.46
MRE11P49959 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.93□□□□□ -1.46
MRE11P49959 AC136624.4-201ENST00000573044 370 ntBASIC5.93□□□□□ -1.46
MRE11P49959 RN7SL176P-201ENST00000580352 264 ntBASIC5.93□□□□□ -1.46
MRE11P49959 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.93□□□□□ -1.46
MRE11P49959 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.93□□□□□ -1.46
MRE11P49959 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.93□□□□□ -1.46
MRE11P49959 AC021749.1-201ENST00000604322 607 ntBASIC5.93□□□□□ -1.46
MRE11P49959 AC009597.2-201ENST00000604659 592 ntBASIC5.93□□□□□ -1.46
MRE11P49959 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.93□□□□□ -1.46
MRE11P49959 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.93□□□□□ -1.46
MRE11P49959 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.93□□□□□ -1.46
MRE11P49959 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
MRE11P49959 SAMMSON-209ENST00000641222 1100 ntBASIC5.93□□□□□ -1.46
MRE11P49959 AC133552.1-201ENST00000569988 4007 ntBASIC5.93□□□□□ -1.46
MRE11P49959 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
MRE11P49959 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.93□□□□□ -1.46
MRE11P49959 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.93□□□□□ -1.46
MRE11P49959 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MRE11P49959 SGO1P2-201ENST00000429458 1589 ntBASIC5.93□□□□□ -1.46
MRE11P49959 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
MRE11P49959 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.92□□□□□ -1.46
MRE11P49959 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MRE11P49959 MTCO1P18-201ENST00000455518 1419 ntBASIC5.92□□□□□ -1.46
MRE11P49959 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.92□□□□□ -1.46
MRE11P49959 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.92□□□□□ -1.46
MRE11P49959 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.92□□□□□ -1.46
MRE11P49959 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
MRE11P49959 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MRE11P49959 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
MRE11P49959 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.92□□□□□ -1.46
MRE11P49959 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MRE11P49959 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
MRE11P49959 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
MRE11P49959 DNAJC19P6-201ENST00000401853 280 ntBASIC5.92□□□□□ -1.46
MRE11P49959 AL390316.1-201ENST00000406279 553 ntBASIC5.92□□□□□ -1.46
MRE11P49959 MTCO3P41-201ENST00000414801 328 ntBASIC5.92□□□□□ -1.46
MRE11P49959 OR4K6P-201ENST00000416478 897 ntBASIC5.92□□□□□ -1.46
MRE11P49959 P2RY10P2-201ENST00000416730 913 ntBASIC5.92□□□□□ -1.46
MRE11P49959 AC093162.1-201ENST00000419682 124 ntBASIC5.92□□□□□ -1.46
MRE11P49959 AC246680.2-201ENST00000422106 389 ntBASIC5.92□□□□□ -1.46
MRE11P49959 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.92□□□□□ -1.46
MRE11P49959 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.92□□□□□ -1.46
MRE11P49959 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC5.92□□□□□ -1.46
MRE11P49959 IFNNP1-201ENST00000429219 553 ntBASIC5.92□□□□□ -1.46
MRE11P49959 AC129850.1-201ENST00000436203 508 ntBASIC5.92□□□□□ -1.46
MRE11P49959 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.92□□□□□ -1.46
MRE11P49959 MTCYBP39-201ENST00000437562 491 ntBASIC5.92□□□□□ -1.46
MRE11P49959 AL592437.1-201ENST00000443781 492 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms