Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM23P36406 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM23P36406 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TRIM23P36406 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM23P36406 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM23P36406 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM23P36406 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
TRIM23P36406 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM23P36406 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM23P36406 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM23P36406 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM23P36406 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM23P36406 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM23P36406 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
TRIM23P36406 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM23P36406 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM23P36406 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.31□□□□□ -1.72
TRIM23P36406 RNU6-452P-201ENST00000384406 107 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 TAF9BP2-201ENST00000400856 499 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 GSTM3P2-201ENST00000412746 530 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM23P36406 AC009965.2-201ENST00000425328 970 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM23P36406 NPM1P24-201ENST00000428039 894 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM23P36406 RPL7P28-201ENST00000437739 740 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 RPL34P26-201ENST00000445636 354 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 NUTF2P3-201ENST00000448540 384 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM23P36406 HMGB1P5-202ENST00000451497 985 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.31□□□□□ -1.72
TRIM23P36406 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
TRIM23P36406 RPS20P4-201ENST00000461659 355 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 RPL21P71-201ENST00000465598 459 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 UQCRHP4-201ENST00000471686 272 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
TRIM23P36406 RPL35P6-201ENST00000490024 372 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 AC106872.2-201ENST00000494303 480 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM23P36406 MTND3P24-201ENST00000506306 329 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 IGBP1P5-201ENST00000507524 1000 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 RNU6-467P-201ENST00000517027 110 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 AP003730.1-201ENST00000524605 285 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM23P36406 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM23P36406 CYCSP29-201ENST00000533731 318 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM23P36406 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM23P36406 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.31□□□□□ -1.72
TRIM23P36406 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TRIM23P36406 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM23P36406 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM23P36406 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM23P36406 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TRIM23P36406 IPO5P1-202ENST00000600039 287 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 AC007423.1-201ENST00000605009 627 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM23P36406 AP004607.9-201ENST00000618202 316 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 AL731566.2-201ENST00000618971 317 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 AC140113.4-201ENST00000622087 222 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TRIM23P36406 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
TRIM23P36406 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM23P36406 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM23P36406 AL158163.1-201ENST00000603915 1649 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM23P36406 AP001002.1-201ENST00000625148 1513 ntBASIC4.31□□□□□ -1.72
TRIM23P36406 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM23P36406 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM23P36406 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
TRIM23P36406 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM23P36406 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM23P36406 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM23P36406 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM23P36406 RPS20P14-201ENST00000412545 360 ntBASIC4.3□□□□□ -1.72
TRIM23P36406 AC013404.1-201ENST00000413068 249 ntBASIC4.3□□□□□ -1.72
TRIM23P36406 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.3□□□□□ -1.72
TRIM23P36406 AL157831.1-201ENST00000426134 473 ntBASIC4.3□□□□□ -1.72
TRIM23P36406 MTCO1P52-201ENST00000433928 531 ntBASIC4.3□□□□□ -1.72
TRIM23P36406 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM23P36406 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM23P36406 RPL21P133-201ENST00000443666 476 ntBASIC4.3□□□□□ -1.72
TRIM23P36406 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM23P36406 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM23P36406 MTND2P30-201ENST00000456663 382 ntBASIC4.3□□□□□ -1.72
TRIM23P36406 ATP5G1P3-201ENST00000463301 410 ntBASIC4.3□□□□□ -1.72
TRIM23P36406 AC103987.1-201ENST00000473394 348 ntBASIC4.3□□□□□ -1.72
TRIM23P36406 SYT14P1-201ENST00000481459 721 ntBASIC4.3□□□□□ -1.72
TRIM23P36406 AC105137.1-201ENST00000484355 562 ntBASIC4.3□□□□□ -1.72
TRIM23P36406 AC093267.1-201ENST00000489176 961 ntBASIC4.3□□□□□ -1.72
TRIM23P36406 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM23P36406 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM23P36406 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
TRIM23P36406 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM23P36406 PARP4P3-201ENST00000510265 317 ntBASIC4.3□□□□□ -1.72
TRIM23P36406 AC008958.1-201ENST00000511047 682 ntBASIC4.3□□□□□ -1.72
TRIM23P36406 SNORA26.10-201ENST00000516427 141 ntBASIC4.3□□□□□ -1.72
TRIM23P36406 AC090151.1-201ENST00000520784 730 ntBASIC4.3□□□□□ -1.72
TRIM23P36406 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM23P36406 CYCSP28-201ENST00000534284 321 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms