Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RNA5SP43-201ENST00000516559 110 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC6A4P31645 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.24□□□□□ -1.57
SLC6A4P31645 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.24□□□□□ -1.57
SLC6A4P31645 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.24□□□□□ -1.57
SLC6A4P31645 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.24□□□□□ -1.57
SLC6A4P31645 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.24□□□□□ -1.57
SLC6A4P31645 AC122134.1-201ENST00000565664 1104 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 MTCYBP13-201ENST00000578634 1093 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 MIR4436B2-201ENST00000581415 91 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 MIR4436B1-201ENST00000583272 91 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC6A4P31645 AC068790.6-201ENST00000602558 258 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 AC103881.1-201ENST00000603476 538 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 MEMO1P5-201ENST00000604810 406 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 AP004247.3-201ENST00000608682 624 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 AC055764.2-201ENST00000610089 670 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC6A4P31645 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.24□□□□□ -1.57
SLC6A4P31645 AC018926.3-201ENST00000618841 406 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 AL607023.1-201ENST00000620045 248 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.24□□□□□ -1.57
SLC6A4P31645 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.24□□□□□ -1.57
SLC6A4P31645 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SLC6A4P31645 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
SLC6A4P31645 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SLC6A4P31645 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.24□□□□□ -1.57
SLC6A4P31645 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SLC6A4P31645 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.24□□□□□ -1.57
SLC6A4P31645 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC6A4P31645 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
SLC6A4P31645 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC6A4P31645 RNF6P1-201ENST00000444889 1784 ntBASIC5.24□□□□□ -1.57
SLC6A4P31645 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC6A4P31645 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC6A4P31645 AC109315.1-201ENST00000584143 1347 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 AP001029.2-203ENST00000589795 4910 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.23□□□□□ -1.57
SLC6A4P31645 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.23□□□□□ -1.57
SLC6A4P31645 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
SLC6A4P31645 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC6A4P31645 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
SLC6A4P31645 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SLC6A4P31645 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SLC6A4P31645 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC6A4P31645 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC6A4P31645 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC6A4P31645 RN7SKP95-201ENST00000362860 303 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 RNU6-839P-201ENST00000363347 108 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 RN7SKP113-201ENST00000363891 295 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC6A4P31645 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC6A4P31645 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC6A4P31645 SNORA51.8-201ENST00000384234 132 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 SNORA66-201ENST00000384792 133 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SLC6A4P31645 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC6A4P31645 AC079809.1-201ENST00000415468 276 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC6A4P31645 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 AC012519.1-201ENST00000424588 610 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC6A4P31645 AC007559.1-201ENST00000428736 355 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 AL050321.1-201ENST00000432363 400 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 MTCYBP39-201ENST00000437562 491 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC6A4P31645 UBE2V1P5-201ENST00000440070 405 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 RPL5P25-201ENST00000441148 775 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 TAF9P1-201ENST00000445421 515 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC6A4P31645 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC6A4P31645 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC6A4P31645 IGHV5-78-201ENST00000450948 295 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC6A4P31645 TAF9P2-201ENST00000454958 515 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC6A4P31645 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC6A4P31645 RNA5SP135-201ENST00000517019 125 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 HMGB1P23-201ENST00000518743 568 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC6A4P31645 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC6A4P31645 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC6A4P31645 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.23□□□□□ -1.57
SLC6A4P31645 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC6A4P31645 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC6A4P31645 AL358913.1-201ENST00000554342 121 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC6A4P31645 GTF2IP8-201ENST00000560687 584 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC6A4P31645 AC090751.1-201ENST00000566966 267 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.23□□□□□ -1.57
SLC6A4P31645 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SLC6A4P31645 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SLC6A4P31645 AC011840.5-201ENST00000582125 771 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 AC008759.1-201ENST00000589783 983 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC6A4P31645 EIF3FP1-201ENST00000613970 806 ntBASIC5.23□□□□□ -1.57
SLC6A4P31645 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms