Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CASQ1P31415 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CASQ1P31415 HMGB1P10-201ENST00000395823 563 ntBASIC4.38□□□□□ -1.71
CASQ1P31415 HSPE1P26-201ENST00000405341 275 ntBASIC4.38□□□□□ -1.71
CASQ1P31415 CHEK2P5-201ENST00000423877 246 ntBASIC4.38□□□□□ -1.71
CASQ1P31415 NPM1P34-201ENST00000428821 893 ntBASIC4.38□□□□□ -1.71
CASQ1P31415 KCTD9P3-201ENST00000434597 1169 ntBASIC4.38□□□□□ -1.71
CASQ1P31415 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.38□□□□□ -1.71
CASQ1P31415 AL500522.2-201ENST00000448562 343 ntBASIC4.38□□□□□ -1.71
CASQ1P31415 CEACAMP6-201ENST00000452007 574 ntBASIC4.38□□□□□ -1.71
CASQ1P31415 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.38□□□□□ -1.71
CASQ1P31415 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.38□□□□□ -1.71
CASQ1P31415 AL136097.1-201ENST00000456945 913 ntBASIC4.38□□□□□ -1.71
CASQ1P31415 AC018638.3-201ENST00000461273 132 ntBASIC4.38□□□□□ -1.71
CASQ1P31415 AC010307.1-201ENST00000467206 836 ntBASIC4.38□□□□□ -1.71
CASQ1P31415 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.38□□□□□ -1.71
CASQ1P31415 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.38□□□□□ -1.71
CASQ1P31415 AC007225.2-201ENST00000562529 256 ntBASIC4.38□□□□□ -1.71
CASQ1P31415 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.38□□□□□ -1.71
CASQ1P31415 AC069061.3-201ENST00000582254 823 ntBASIC4.38□□□□□ -1.71
CASQ1P31415 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.38□□□□□ -1.71
CASQ1P31415 FAM60CP-201ENST00000591086 664 ntBASIC4.38□□□□□ -1.71
CASQ1P31415 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.38□□□□□ -1.71
CASQ1P31415 EIF1P6-201ENST00000600054 334 ntBASIC4.38□□□□□ -1.71
CASQ1P31415 SUMO2P15-201ENST00000604285 278 ntBASIC4.38□□□□□ -1.71
CASQ1P31415 AC055764.2-201ENST00000610089 670 ntBASIC4.38□□□□□ -1.71
CASQ1P31415 AP005019.3-201ENST00000620418 560 ntBASIC4.38□□□□□ -1.71
CASQ1P31415 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.38□□□□□ -1.71
CASQ1P31415 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CASQ1P31415 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CASQ1P31415 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CASQ1P31415 UBE3AP2-201ENST00000429033 2259 ntBASIC4.38□□□□□ -1.71
CASQ1P31415 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.38□□□□□ -1.71
CASQ1P31415 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.38□□□□□ -1.71
CASQ1P31415 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.37□□□□□ -1.71
CASQ1P31415 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CASQ1P31415 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.37□□□□□ -1.71
CASQ1P31415 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CASQ1P31415 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CASQ1P31415 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CASQ1P31415 OR5P1P-201ENST00000299512 925 ntBASIC4.37□□□□□ -1.71
CASQ1P31415 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.37□□□□□ -1.71
CASQ1P31415 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CASQ1P31415 AL049697.2-201ENST00000403708 294 ntBASIC4.37□□□□□ -1.71
CASQ1P31415 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.37□□□□□ -1.71
CASQ1P31415 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.37□□□□□ -1.71
CASQ1P31415 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.37□□□□□ -1.71
CASQ1P31415 AL157831.1-201ENST00000426134 473 ntBASIC4.37□□□□□ -1.71
CASQ1P31415 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.37□□□□□ -1.71
CASQ1P31415 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.37□□□□□ -1.71
CASQ1P31415 ELOCP11-201ENST00000436690 332 ntBASIC4.37□□□□□ -1.71
CASQ1P31415 CEACAMP7-201ENST00000444105 496 ntBASIC4.37□□□□□ -1.71
CASQ1P31415 ELOCP16-201ENST00000444494 332 ntBASIC4.37□□□□□ -1.71
CASQ1P31415 RPL21P126-201ENST00000470049 478 ntBASIC4.37□□□□□ -1.71
CASQ1P31415 AL049830.2-201ENST00000480072 201 ntBASIC4.37□□□□□ -1.71
CASQ1P31415 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.37□□□□□ -1.71
CASQ1P31415 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.37□□□□□ -1.71
CASQ1P31415 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.37□□□□□ -1.71
CASQ1P31415 AC005921.1-201ENST00000510589 286 ntBASIC4.37□□□□□ -1.71
CASQ1P31415 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.37□□□□□ -1.71
CASQ1P31415 RNU7-143P-201ENST00000516781 65 ntBASIC4.37□□□□□ -1.71
CASQ1P31415 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.37□□□□□ -1.71
CASQ1P31415 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.37□□□□□ -1.71
CASQ1P31415 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.37□□□□□ -1.71
CASQ1P31415 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.37□□□□□ -1.71
CASQ1P31415 AC018754.1-201ENST00000607486 925 ntBASIC4.37□□□□□ -1.71
CASQ1P31415 AL591424.2-201ENST00000617023 128 ntBASIC4.37□□□□□ -1.71
CASQ1P31415 AC015726.3-201ENST00000624501 418 ntBASIC4.37□□□□□ -1.71
CASQ1P31415 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.37□□□□□ -1.71
CASQ1P31415 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.37□□□□□ -1.71
CASQ1P31415 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CASQ1P31415 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CASQ1P31415 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.37□□□□□ -1.71
CASQ1P31415 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CASQ1P31415 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CASQ1P31415 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CASQ1P31415 AL359715.4-201ENST00000606629 1436 ntBASIC4.37□□□□□ -1.71
CASQ1P31415 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.36□□□□□ -1.71
CASQ1P31415 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
CASQ1P31415 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CASQ1P31415 OTUD4P1-201ENST00000237841 3067 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CASQ1P31415 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CASQ1P31415 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CASQ1P31415 RNA5SP36-201ENST00000410197 133 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 AC007390.1-201ENST00000415722 356 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 TMSB10P2-201ENST00000416049 131 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CASQ1P31415 AL355433.1-201ENST00000422804 300 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CASQ1P31415 USP9YP31-201ENST00000431405 881 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 RPS24P8-201ENST00000431490 402 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.36□□□□□ -1.71
CASQ1P31415 AL359265.2-201ENST00000434367 631 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 CYCSP43-201ENST00000438233 310 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 RPL23AP52-201ENST00000439311 478 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CASQ1P31415 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.36□□□□□ -1.71
CASQ1P31415 AC091685.2-201ENST00000454924 864 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms