Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CNGA1P29973 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CNGA1P29973 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.9□□□□□ -1.46
CNGA1P29973 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CNGA1P29973 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
CNGA1P29973 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
CNGA1P29973 SGO1P2-201ENST00000429458 1589 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.9□□□□□ -1.46
CNGA1P29973 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CNGA1P29973 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CNGA1P29973 U3.3-201ENST00000362986 216 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.9□□□□□ -1.46
CNGA1P29973 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CNGA1P29973 NCSTNP1-201ENST00000406229 144 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 RPS16P5-201ENST00000406501 404 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 PRELID3BP11-201ENST00000414230 479 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 AC009237.2-201ENST00000421358 284 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 DDX39BP1-205ENST00000422507 192 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.9□□□□□ -1.46
CNGA1P29973 RPS26P47-201ENST00000427219 348 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 DNAJC19P7-201ENST00000428811 344 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.9□□□□□ -1.46
CNGA1P29973 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.9□□□□□ -1.46
CNGA1P29973 AC112498.1-201ENST00000444401 332 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 AL122001.1-201ENST00000457027 370 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 RN7SL244P-201ENST00000493405 297 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.9□□□□□ -1.46
CNGA1P29973 AC025674.1-201ENST00000507074 324 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.9□□□□□ -1.46
CNGA1P29973 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.9□□□□□ -1.46
CNGA1P29973 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.9□□□□□ -1.46
CNGA1P29973 RNU6-202P-201ENST00000515998 96 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 Y_RNA.688-201ENST00000516565 95 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.9□□□□□ -1.46
CNGA1P29973 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.9□□□□□ -1.46
CNGA1P29973 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
CNGA1P29973 HIGD1AP17-201ENST00000554576 276 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 AC008015.1-201ENST00000555505 465 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.9□□□□□ -1.46
CNGA1P29973 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.9□□□□□ -1.46
CNGA1P29973 AC018552.3-201ENST00000567416 561 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 VN1R82P-201ENST00000601481 356 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 AC096553.1-201ENST00000605169 829 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 AC007786.3-201ENST00000615154 596 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
CNGA1P29973 AP001005.3-201ENST00000622049 129 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 AC116618.1-201ENST00000634617 774 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.9□□□□□ -1.46
CNGA1P29973 MKKS-204ENST00000639674 192 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 AC107027.3-201ENST00000565095 3473 ntBASIC5.9□□□□□ -1.46
CNGA1P29973 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CNGA1P29973 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CNGA1P29973 AC092376.2-201ENST00000622621 4116 ntBASIC5.9□□□□□ -1.47
CNGA1P29973 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CNGA1P29973 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CNGA1P29973 AC005539.1-201ENST00000443768 1479 ntBASIC5.9□□□□□ -1.47
CNGA1P29973 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
CNGA1P29973 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CNGA1P29973 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CNGA1P29973 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.89□□□□□ -1.47
CNGA1P29973 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 ABCC13-202ENST00000463099 3842 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CNGA1P29973 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.89□□□□□ -1.47
CNGA1P29973 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.89□□□□□ -1.47
CNGA1P29973 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.89□□□□□ -1.47
CNGA1P29973 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CNGA1P29973 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CNGA1P29973 AC016716.1-201ENST00000265882 708 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CNGA1P29973 OR56B2P-201ENST00000317102 954 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 IL6STP1-201ENST00000346911 1020 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CNGA1P29973 ATP5F1P3-201ENST00000397213 657 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 RPL23AP47-201ENST00000408017 460 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.89□□□□□ -1.47
CNGA1P29973 RNU2-42P-201ENST00000410697 113 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 RNU4-72P-201ENST00000410754 173 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 FCF1P2-201ENST00000415284 583 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.89□□□□□ -1.47
CNGA1P29973 AC009518.2-201ENST00000418056 731 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 BOLA3P4-201ENST00000418151 400 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 AC233981.1-201ENST00000423224 461 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.89□□□□□ -1.47
CNGA1P29973 SKP1P3-201ENST00000429280 487 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 AL365396.1-201ENST00000430854 671 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 AC016712.1-201ENST00000431088 378 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.89□□□□□ -1.47
CNGA1P29973 RHOT1P3-201ENST00000436571 331 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 UBE2D3P1-201ENST00000436669 444 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 MTND5P2-201ENST00000442927 1142 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.89□□□□□ -1.47
CNGA1P29973 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.89□□□□□ -1.47
CNGA1P29973 EEF1A1P1-201ENST00000447052 739 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.89□□□□□ -1.47
CNGA1P29973 TPT1P12-201ENST00000448968 492 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.89□□□□□ -1.47
CNGA1P29973 AC010307.1-201ENST00000467206 836 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 BET1P1-201ENST00000482276 359 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms