| PTPN2 | P17706 | AL139327.2-202 | ENST00000437057 | 400 nt | TSL 3 BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | RPL7P29-201 | ENST00000437151 | 728 nt | BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | LINC01802-201 | ENST00000438824 | 523 nt | TSL 3 BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | AC092170.1-201 | ENST00000440211 | 356 nt | BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | AL357520.1-201 | ENST00000441557 | 453 nt | BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | TBX18-AS1-202 | ENST00000441863 | 382 nt | TSL 2 BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | MTOR-AS1-202 | ENST00000445982 | 705 nt | TSL 5 BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | SEPT14P24-201 | ENST00000447236 | 180 nt | BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | AC239809.1-201 | ENST00000450470 | 217 nt | BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | ATP5A1P7-201 | ENST00000453978 | 1279 nt | BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | RPL7P32-201 | ENST00000457119 | 744 nt | BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | RNU6ATAC28P-201 | ENST00000459249 | 118 nt | BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | RPL7AP28-201 | ENST00000464513 | 571 nt | BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | MTND4LP2-201 | ENST00000502312 | 285 nt | BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | CDV3-208 | ENST00000511392 | 554 nt | TSL 5 BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | AC008700.1-201 | ENST00000512571 | 654 nt | TSL 3 BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | RN7SKP46-201 | ENST00000515942 | 234 nt | BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | RPL23AP53-201 | ENST00000521854 | 457 nt | BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | MFAP5-205 | ENST00000535336 | 566 nt | TSL 4 BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | AC006518.2-201 | ENST00000542513 | 940 nt | BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | AC011595.3-201 | ENST00000546699 | 632 nt | TSL 3 BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | AC073525.1-201 | ENST00000549762 | 543 nt | TSL 3 BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | LINC00644-201 | ENST00000555156 | 295 nt | TSL 2 BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | AL132857.1-201 | ENST00000555180 | 708 nt | BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | AC068446.3-201 | ENST00000555285 | 382 nt | BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | AC103739.1-201 | ENST00000558389 | 474 nt | TSL 3 BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | AC012170.3-201 | ENST00000560159 | 297 nt | TSL 2 BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | FOPNL-208 | ENST00000575744 | 565 nt | TSL 4 BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | ZNF92P3-201 | ENST00000596594 | 954 nt | BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | AL161896.1-201 | ENST00000597248 | 508 nt | TSL 4 BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | RNU4-5P-201 | ENST00000607255 | 135 nt | BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | LINC02098-201 | ENST00000608492 | 475 nt | TSL 3 BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | AL133243.1-201 | ENST00000614487 | 366 nt | BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | AL356863.1-201 | ENST00000623378 | 1080 nt | BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | AC097520.1-201 | ENST00000624435 | 385 nt | BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | PIK3C3-201 | ENST00000262039 | 9443 nt | APPRIS P1 TSL 1 (best) BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | PTPN22-201 | ENST00000359785 | 3654 nt | APPRIS P2 TSL 1 (best) BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | KTN1-223 | ENST00000555573 | 1712 nt | TSL 2 BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | AC021086.1-201 | ENST00000499025 | 1569 nt | TSL 3 BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | AC108467.2-201 | ENST00000617640 | 1597 nt | BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | NFE2L2-204 | ENST00000423513 | 1382 nt | TSL 1 (best) BASIC | 4.91 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | MYBPC1-205 | ENST00000536007 | 3512 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.9 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | MYBPC1-206 | ENST00000541119 | 3533 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.9 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | ALG6-201 | ENST00000263440 | 1895 nt | APPRIS ALT1 TSL 5 BASIC | 4.9 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | RABGAP1L-202 | ENST00000325589 | 1880 nt | TSL 1 (best) BASIC | 4.9 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | AADACL2-201 | ENST00000356517 | 1487 nt | APPRIS P1 TSL 1 (best) BASIC | 4.9 | □□□□□ -1.62 | | |
| PTPN2 | P17706 | AC004057.1-202 | ENST00000356247 | 284 nt | TSL 3 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | RNU6-98P-201 | ENST00000384173 | 107 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | TRAV21-201 | ENST00000390449 | 343 nt | APPRIS P1 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AL590762.2-201 | ENST00000395798 | 571 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | ANAPC10P1-201 | ENST00000395991 | 556 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | RNU4-25P-201 | ENST00000410569 | 230 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | LIPT1P1-201 | ENST00000415870 | 1186 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AL157378.1-201 | ENST00000424506 | 265 nt | TSL 5 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AC073069.1-201 | ENST00000428657 | 441 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | RPS24P8-201 | ENST00000431490 | 402 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AP000855.1-201 | ENST00000433210 | 636 nt | TSL 2 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AL031663.1-201 | ENST00000437445 | 219 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | LIX1L-AS1-205 | ENST00000437797 | 536 nt | TSL 3 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AL358794.1-201 | ENST00000445689 | 381 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AL356421.2-201 | ENST00000446733 | 197 nt | TSL 3 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | LINC01312-202 | ENST00000456347 | 813 nt | TSL 1 (best) BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AC083829.1-201 | ENST00000503756 | 657 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AC091826.2-201 | ENST00000504034 | 412 nt | TSL 3 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AC026719.1-201 | ENST00000506059 | 456 nt | TSL 3 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | OR52Z1-201 | ENST00000510471 | 897 nt | APPRIS P1 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | TCP11X3P-202 | ENST00000514289 | 1254 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | RNA5SP303-201 | ENST00000516192 | 130 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | LINC01932-201 | ENST00000520323 | 573 nt | TSL 5 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | OR10V3P-201 | ENST00000525712 | 725 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AF233439.1-201 | ENST00000526235 | 401 nt | TSL 3 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AP002340.1-201 | ENST00000529298 | 285 nt | TSL 3 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AP000462.1-201 | ENST00000535704 | 818 nt | TSL 3 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | RAD51AP1-213 | ENST00000544927 | 787 nt | TSL 4 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AC087897.1-201 | ENST00000550134 | 156 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AC008147.1-201 | ENST00000551284 | 325 nt | TSL 3 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | LINC02303-202 | ENST00000554711 | 531 nt | TSL 3 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AL158801.3-201 | ENST00000555514 | 363 nt | TSL 3 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AC012404.2-201 | ENST00000558572 | 481 nt | TSL 3 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AC027104.1-201 | ENST00000563702 | 681 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | SATB1-AS1-222 | ENST00000600177 | 751 nt | TSL 5 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AC008782.1-201 | ENST00000603386 | 430 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | SNORD91B-202 | ENST00000608459 | 222 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AC005962.2-201 | ENST00000611427 | 652 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | BX005214.3-202 | ENST00000619809 | 325 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AC005858.1-201 | ENST00000620193 | 677 nt | TSL 2 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AP000648.2-201 | ENST00000624182 | 404 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AC009303.2-205 | ENST00000627670 | 1091 nt | TSL 5 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | AC074099.1-201 | ENST00000634100 | 679 nt | TSL 5 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | U6.107-201 | ENST00000637108 | 79 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | RUVBL2-213 | ENST00000639391 | 120 nt | TSL 5 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | KLF12-201 | ENST00000377669 | 10637 nt | APPRIS P1 TSL 1 (best) BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | STAP1-201 | ENST00000265404 | 1511 nt | APPRIS P1 TSL 1 (best) BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | GPR85-201 | ENST00000297146 | 5079 nt | APPRIS P1 TSL 1 (best) BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | RAD17P1-201 | ENST00000418130 | 2042 nt | BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | GABRG2-217 | ENST00000639384 | 5360 nt | TSL 5 BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | LINC01289-201 | ENST00000519550 | 3712 nt | TSL 1 (best) BASIC | 4.9 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | GPATCH2L-214 | ENST00000621494 | 12396 nt | APPRIS P1 TSL 2 BASIC | 4.89 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | SCN3A-202 | ENST00000360093 | 9123 nt | APPRIS ALT1 TSL 5 BASIC | 4.89 | □□□□□ -1.63 | | |
| PTPN2 | P17706 | DMXL2-203 | ENST00000543779 | 10400 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.89 | □□□□□ -1.63 | | |