Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RARAP10276 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC6.45□□□□□ -1.38
RARAP10276 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC6.45□□□□□ -1.38
RARAP10276 AL109766.1-201ENST00000555080 552 ntBASIC6.45□□□□□ -1.38
RARAP10276 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.45□□□□□ -1.38
RARAP10276 AC090751.1-201ENST00000566966 267 ntBASIC6.45□□□□□ -1.38
RARAP10276 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.45□□□□□ -1.38
RARAP10276 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.45□□□□□ -1.38
RARAP10276 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.45□□□□□ -1.38
RARAP10276 AL360012.1-201ENST00000602813 131 ntBASIC6.45□□□□□ -1.38
RARAP10276 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.45□□□□□ -1.38
RARAP10276 uc_338.5-201ENST00000611839 155 ntBASIC6.45□□□□□ -1.38
RARAP10276 AL137067.2-201ENST00000621202 131 ntBASIC6.45□□□□□ -1.38
RARAP10276 AC145207.9-201ENST00000623802 325 ntBASIC6.45□□□□□ -1.38
RARAP10276 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
RARAP10276 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
RARAP10276 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RARAP10276 OR11H5P-202ENST00000641612 1325 ntBASIC6.45□□□□□ -1.38
RARAP10276 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RARAP10276 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RARAP10276 AL121950.1-201ENST00000624993 2077 ntBASIC6.45□□□□□ -1.38
RARAP10276 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RARAP10276 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
RARAP10276 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RARAP10276 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RARAP10276 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RARAP10276 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
RARAP10276 RLIMP2-201ENST00000427891 1563 ntBASIC6.44□□□□□ -1.38
RARAP10276 LINC00622-201ENST00000562811 1570 ntBASIC6.44□□□□□ -1.38
RARAP10276 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
RARAP10276 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RARAP10276 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RARAP10276 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.44□□□□□ -1.38
RARAP10276 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RARAP10276 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.44□□□□□ -1.38
RARAP10276 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.44□□□□□ -1.38
RARAP10276 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
RARAP10276 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.44□□□□□ -1.38
RARAP10276 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.44□□□□□ -1.38
RARAP10276 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.44□□□□□ -1.38
RARAP10276 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RARAP10276 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
RARAP10276 OR5J1P-201ENST00000313544 939 ntBASIC6.44□□□□□ -1.38
RARAP10276 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
RARAP10276 Y_RNA.216-201ENST00000364205 93 ntBASIC6.44□□□□□ -1.38
RARAP10276 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC6.44□□□□□ -1.38
RARAP10276 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RARAP10276 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
RARAP10276 RNU6-272P-201ENST00000411028 104 ntBASIC6.44□□□□□ -1.38
RARAP10276 SNRPFP1-201ENST00000414761 252 ntBASIC6.44□□□□□ -1.38
RARAP10276 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.44□□□□□ -1.38
RARAP10276 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.44□□□□□ -1.38
RARAP10276 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.44□□□□□ -1.38
RARAP10276 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.44□□□□□ -1.38
RARAP10276 RPL35AP12-201ENST00000425362 338 ntBASIC6.44□□□□□ -1.38
RARAP10276 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC6.44□□□□□ -1.38
RARAP10276 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RARAP10276 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.44□□□□□ -1.38
RARAP10276 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC6.44□□□□□ -1.38
RARAP10276 LINC00328-2P-201ENST00000436585 219 ntBASIC6.44□□□□□ -1.38
RARAP10276 BRK1P2-201ENST00000442875 223 ntBASIC6.44□□□□□ -1.38
RARAP10276 AL356121.1-201ENST00000442911 156 ntBASIC6.44□□□□□ -1.38
RARAP10276 HIGD1AP16-201ENST00000450986 258 ntBASIC6.44□□□□□ -1.38
RARAP10276 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.44□□□□□ -1.38
RARAP10276 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.44□□□□□ -1.38
RARAP10276 Y_RNA.710-201ENST00000516975 110 ntBASIC6.44□□□□□ -1.38
RARAP10276 SCARNA6.1-201ENST00000516989 238 ntBASIC6.44□□□□□ -1.38
RARAP10276 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.44□□□□□ -1.38
RARAP10276 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.44□□□□□ -1.38
RARAP10276 DUX4L52-201ENST00000549363 777 ntBASIC6.44□□□□□ -1.38
RARAP10276 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC6.44□□□□□ -1.38
RARAP10276 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.44□□□□□ -1.38
RARAP10276 RNU4ATAC-201ENST00000580972 127 ntBASIC6.44□□□□□ -1.38
RARAP10276 AC090236.2-201ENST00000587933 1101 ntBASIC6.44□□□□□ -1.38
RARAP10276 RNU6-87P-201ENST00000607561 108 ntBASIC6.44□□□□□ -1.38
RARAP10276 AL080312.2-201ENST00000613001 630 ntBASIC6.44□□□□□ -1.38
RARAP10276 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC6.44□□□□□ -1.38
RARAP10276 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC6.44□□□□□ -1.38
RARAP10276 AC069234.4-201ENST00000621276 412 ntBASIC6.44□□□□□ -1.38
RARAP10276 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.44□□□□□ -1.38
RARAP10276 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RARAP10276 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RARAP10276 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RARAP10276 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RARAP10276 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
RARAP10276 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
RARAP10276 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RARAP10276 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.44□□□□□ -1.38
RARAP10276 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.44□□□□□ -1.38
RARAP10276 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.44□□□□□ -1.38
RARAP10276 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RARAP10276 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
RARAP10276 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.44□□□□□ -1.38
RARAP10276 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RARAP10276 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.43□□□□□ -1.38
RARAP10276 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RARAP10276 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
RARAP10276 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RARAP10276 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.43□□□□□ -1.38
RARAP10276 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms