Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.09□□□□□ -1.76
LSM1O15116 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LSM1O15116 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
LSM1O15116 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.76
LSM1O15116 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LSM1O15116 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LSM1O15116 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LSM1O15116 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LSM1O15116 AC079741.1-201ENST00000321498 212 ntBASIC4.08□□□□□ -1.76
LSM1O15116 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
LSM1O15116 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LSM1O15116 RNU6-328P-201ENST00000390887 106 ntBASIC4.08□□□□□ -1.76
LSM1O15116 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
LSM1O15116 MIR1179-201ENST00000408703 91 ntBASIC4.08□□□□□ -1.76
LSM1O15116 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.08□□□□□ -1.76
LSM1O15116 PTP4A1P5-201ENST00000420305 455 ntBASIC4.08□□□□□ -1.76
LSM1O15116 AL356387.2-201ENST00000422272 243 ntBASIC4.08□□□□□ -1.76
LSM1O15116 AL606490.8-201ENST00000441624 319 ntBASIC4.08□□□□□ -1.76
LSM1O15116 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.08□□□□□ -1.76
LSM1O15116 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.08□□□□□ -1.76
LSM1O15116 HMGB1P26-201ENST00000452520 628 ntBASIC4.08□□□□□ -1.76
LSM1O15116 RAD23BP3-201ENST00000454157 1152 ntBASIC4.08□□□□□ -1.76
LSM1O15116 RPL23AP81-201ENST00000455252 467 ntBASIC4.08□□□□□ -1.76
LSM1O15116 HMGN2P7-201ENST00000456186 273 ntBASIC4.08□□□□□ -1.76
LSM1O15116 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
LSM1O15116 AL136097.1-201ENST00000456945 913 ntBASIC4.08□□□□□ -1.76
LSM1O15116 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.08□□□□□ -1.76
LSM1O15116 RN7SL481P-201ENST00000477764 299 ntBASIC4.08□□□□□ -1.76
LSM1O15116 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
LSM1O15116 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.08□□□□□ -1.76
LSM1O15116 AC016550.3-201ENST00000515706 767 ntBASIC4.08□□□□□ -1.76
LSM1O15116 RNA5SP73-201ENST00000516744 108 ntBASIC4.08□□□□□ -1.76
LSM1O15116 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.08□□□□□ -1.76
LSM1O15116 OR8G5-201ENST00000524943 1041 ntBASIC4.08□□□□□ -1.76
LSM1O15116 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.08□□□□□ -1.76
LSM1O15116 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.08□□□□□ -1.76
LSM1O15116 AC023158.1-201ENST00000561632 1025 ntBASIC4.08□□□□□ -1.76
LSM1O15116 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.08□□□□□ -1.76
LSM1O15116 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.08□□□□□ -1.76
LSM1O15116 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.08□□□□□ -1.76
LSM1O15116 AC103710.3-201ENST00000608157 948 ntBASIC4.08□□□□□ -1.76
LSM1O15116 AC004943.3-201ENST00000624116 600 ntBASIC4.08□□□□□ -1.76
LSM1O15116 AC140479.6-201ENST00000633535 357 ntBASIC4.08□□□□□ -1.76
LSM1O15116 MFSD8-220ENST00000641243 1422 ntBASIC4.08□□□□□ -1.76
LSM1O15116 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LSM1O15116 ASNSP1-204ENST00000641977 1664 ntBASIC4.07□□□□□ -1.76
LSM1O15116 ZNF962P-201ENST00000443465 3140 ntBASIC4.07□□□□□ -1.76
LSM1O15116 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LSM1O15116 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.07□□□□□ -1.76
LSM1O15116 RNVU1-6-201ENST00000364688 164 ntBASIC4.07□□□□□ -1.76
LSM1O15116 RNU6-185P-201ENST00000384421 107 ntBASIC4.07□□□□□ -1.76
LSM1O15116 MIR7-1-201ENST00000384871 110 ntBASIC4.07□□□□□ -1.76
LSM1O15116 MIR129-1-201ENST00000384972 72 ntBASIC4.07□□□□□ -1.76
LSM1O15116 AL035419.1-201ENST00000397037 564 ntBASIC4.07□□□□□ -1.76
LSM1O15116 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.07□□□□□ -1.76
LSM1O15116 RPS12P23-201ENST00000419579 400 ntBASIC4.07□□□□□ -1.76
LSM1O15116 AL157831.1-201ENST00000426134 473 ntBASIC4.07□□□□□ -1.76
LSM1O15116 BRWD1P3-201ENST00000428816 390 ntBASIC4.07□□□□□ -1.76
LSM1O15116 MTCO1P54-201ENST00000430139 712 ntBASIC4.07□□□□□ -1.76
LSM1O15116 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.07□□□□□ -1.76
LSM1O15116 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.07□□□□□ -1.76
LSM1O15116 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LSM1O15116 AC006466.1-201ENST00000438721 289 ntBASIC4.07□□□□□ -1.76
LSM1O15116 XKRYP6-201ENST00000440468 1116 ntBASIC4.07□□□□□ -1.76
LSM1O15116 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.07□□□□□ -1.76
LSM1O15116 XKRYP3-201ENST00000442113 1116 ntBASIC4.07□□□□□ -1.76
LSM1O15116 AL512326.1-201ENST00000443050 721 ntBASIC4.07□□□□□ -1.76
LSM1O15116 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.07□□□□□ -1.76
LSM1O15116 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.07□□□□□ -1.76
LSM1O15116 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.07□□□□□ -1.76
LSM1O15116 AC092691.2-201ENST00000461787 803 ntBASIC4.07□□□□□ -1.76
LSM1O15116 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.07□□□□□ -1.76
LSM1O15116 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.07□□□□□ -1.76
LSM1O15116 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.07□□□□□ -1.76
LSM1O15116 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.07□□□□□ -1.76
LSM1O15116 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
LSM1O15116 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.07□□□□□ -1.76
LSM1O15116 IGKV2D-10-201ENST00000520194 281 ntBASIC4.07□□□□□ -1.76
LSM1O15116 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.07□□□□□ -1.76
LSM1O15116 AC074029.2-201ENST00000551045 634 ntBASIC4.07□□□□□ -1.76
LSM1O15116 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.07□□□□□ -1.76
LSM1O15116 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.07□□□□□ -1.76
LSM1O15116 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.07□□□□□ -1.76
LSM1O15116 AC093765.1-201ENST00000603758 881 ntBASIC4.07□□□□□ -1.76
LSM1O15116 AL049634.3-201ENST00000604968 457 ntBASIC4.07□□□□□ -1.76
LSM1O15116 AC012603.1-201ENST00000606424 528 ntBASIC4.07□□□□□ -1.76
LSM1O15116 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LSM1O15116 AC012531.5-201ENST00000611375 151 ntBASIC4.07□□□□□ -1.76
LSM1O15116 AL445363.3-201ENST00000623080 671 ntBASIC4.07□□□□□ -1.76
LSM1O15116 AC116563.2-201ENST00000624751 535 ntBASIC4.07□□□□□ -1.76
LSM1O15116 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LSM1O15116 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
LSM1O15116 RNF6P1-201ENST00000444889 1784 ntBASIC4.07□□□□□ -1.76
LSM1O15116 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.07□□□□□ -1.76
LSM1O15116 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LSM1O15116 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LSM1O15116 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LSM1O15116 AC006042.3-201ENST00000454684 1469 ntBASIC4.06□□□□□ -1.76
LSM1O15116 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
LSM1O15116 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms