Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 GEMIN8P3-201ENST00000445417 720 ntBASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 AC013356.1-201ENST00000489027 564 ntBASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 RNU6-467P-201ENST00000517027 110 ntBASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 MTND1P36-201ENST00000522384 936 ntBASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 OR5AK3P-201ENST00000527486 1297 ntBASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 RPL23AP97-201ENST00000568955 471 ntBASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 AC115085.1-201ENST00000588924 229 ntBASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 AL356218.2-201ENST00000605264 187 ntBASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 CDRT1-208ENST00000630868 794 ntBASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.17□□□□□ -1.74
ATG4BQ9Y4P1 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 AL139811.1-201ENST00000424779 2299 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 HSPA8P19-201ENST00000505359 1517 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 AL049737.1-201ENST00000413920 1403 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 IL6STP1-201ENST00000346911 1020 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 RNA5SP447-201ENST00000363749 119 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 RNA5SP22-201ENST00000365393 109 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 RNA5SP372-201ENST00000390836 115 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 LAP3P1-201ENST00000403648 294 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 AL356387.2-201ENST00000422272 243 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 DYNLL1P7-201ENST00000429273 258 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 CEACAMP1-201ENST00000434624 1035 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 AP000949.1-201ENST00000438328 629 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 AC114495.1-201ENST00000441274 436 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 Z95152.1-201ENST00000453556 656 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 NDUFA5P9-201ENST00000472609 340 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 RN7SL860P-201ENST00000473738 223 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 RN7SL41P-201ENST00000476144 297 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 RWDD4P1-201ENST00000488019 565 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 ATP1B1P1-201ENST00000509767 915 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 HMGB3P13-201ENST00000511263 607 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 IGLVIV-65-201ENST00000517313 360 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 OR8G5-201ENST00000524943 1041 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 GLRXP2-201ENST00000555594 321 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 AC068831.4-201ENST00000556118 109 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 MIR4277-201ENST00000578298 84 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 NF1P5-201ENST00000588287 448 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 AC008759.1-201ENST00000589783 983 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 AC079587.1-201ENST00000603846 277 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 AC005191.1-201ENST00000603950 358 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 AC026979.4-201ENST00000606555 645 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 AC097460.3-201ENST00000623099 442 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 AP000720.1-201ENST00000625091 483 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 AC025031.4-201ENST00000621248 3271 ntBASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ATG4BQ9Y4P1 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ATG4BQ9Y4P1 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
ATG4BQ9Y4P1 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
ATG4BQ9Y4P1 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
ATG4BQ9Y4P1 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.15□□□□□ -1.74
ATG4BQ9Y4P1 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 AC126755.2-208ENST00000327792 462 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 AC138969.1-213ENST00000331436 462 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 RNU6-609P-201ENST00000365459 107 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 OR6K3-202ENST00000368146 996 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 RNU6-1005P-201ENST00000384519 107 ntBASIC4.15□□□□□ -1.75
ATG4BQ9Y4P1 U3.22-201ENST00000391120 215 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms