Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 RN7SL601P-201ENST00000471221 293 ntBASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 AL136126.1-201ENST00000473603 402 ntBASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 UBTFL9-201ENST00000534504 1148 ntBASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 GNRHR2P1-201ENST00000555315 631 ntBASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 AL133247.2-201ENST00000603236 482 ntBASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.72□□□□□ -1.49
SHANK2Q9UPX8 AC083899.2-201ENST00000423285 1376 ntBASIC5.71□□□□□ -1.49
SHANK2Q9UPX8 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.71□□□□□ -1.49
SHANK2Q9UPX8 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.71□□□□□ -1.49
SHANK2Q9UPX8 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
SHANK2Q9UPX8 GSTM3P2-201ENST00000412746 530 ntBASIC5.71□□□□□ -1.49
SHANK2Q9UPX8 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.71□□□□□ -1.49
SHANK2Q9UPX8 AC006994.1-201ENST00000438212 839 ntBASIC5.71□□□□□ -1.49
SHANK2Q9UPX8 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.71□□□□□ -1.49
SHANK2Q9UPX8 AC008155.2-201ENST00000464337 397 ntBASIC5.71□□□□□ -1.49
SHANK2Q9UPX8 AC017015.1-201ENST00000477387 286 ntBASIC5.71□□□□□ -1.49
SHANK2Q9UPX8 RNA5SP208-201ENST00000516156 78 ntBASIC5.71□□□□□ -1.49
SHANK2Q9UPX8 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.71□□□□□ -1.49
SHANK2Q9UPX8 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.71□□□□□ -1.49
SHANK2Q9UPX8 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.71□□□□□ -1.49
SHANK2Q9UPX8 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.71□□□□□ -1.49
SHANK2Q9UPX8 AL137849.1-201ENST00000604767 169 ntBASIC5.71□□□□□ -1.49
SHANK2Q9UPX8 AL139089.1-201ENST00000620372 975 ntBASIC5.71□□□□□ -1.49
SHANK2Q9UPX8 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SHANK2Q9UPX8 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
SHANK2Q9UPX8 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 HCFC2P1-201ENST00000392864 1592 ntBASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 NPM1P25-201ENST00000429734 854 ntBASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 SETD6P1-201ENST00000444575 317 ntBASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 AC073387.1-201ENST00000453261 709 ntBASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 PRELID3BP6-201ENST00000503839 571 ntBASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 RN7SKP18-201ENST00000516005 275 ntBASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 AP005205.1-201ENST00000563503 508 ntBASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 AC016839.1-201ENST00000578162 867 ntBASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 SNORA62.6-201ENST00000606322 83 ntBASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.71□□□□□ -1.5
SHANK2Q9UPX8 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHANK2Q9UPX8 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHANK2Q9UPX8 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHANK2Q9UPX8 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHANK2Q9UPX8 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
SHANK2Q9UPX8 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHANK2Q9UPX8 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SHANK2Q9UPX8 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.7□□□□□ -1.5
SHANK2Q9UPX8 DPPA2P2-201ENST00000418220 897 ntBASIC5.7□□□□□ -1.5
SHANK2Q9UPX8 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC5.7□□□□□ -1.5
SHANK2Q9UPX8 AL035423.1-201ENST00000420331 213 ntBASIC5.7□□□□□ -1.5
SHANK2Q9UPX8 EIF4EP1-201ENST00000422311 642 ntBASIC5.7□□□□□ -1.5
SHANK2Q9UPX8 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.7□□□□□ -1.5
SHANK2Q9UPX8 ARL4AP1-201ENST00000503220 705 ntBASIC5.7□□□□□ -1.5
SHANK2Q9UPX8 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.7□□□□□ -1.5
SHANK2Q9UPX8 RANP9-201ENST00000519957 271 ntBASIC5.7□□□□□ -1.5
SHANK2Q9UPX8 DEFB109D-201ENST00000529497 240 ntBASIC5.7□□□□□ -1.5
SHANK2Q9UPX8 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.7□□□□□ -1.5
SHANK2Q9UPX8 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.7□□□□□ -1.5
SHANK2Q9UPX8 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.7□□□□□ -1.5
SHANK2Q9UPX8 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.7□□□□□ -1.5
SHANK2Q9UPX8 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SHANK2Q9UPX8 AC004944.1-201ENST00000517807 3059 ntBASIC5.7□□□□□ -1.5
SHANK2Q9UPX8 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SHANK2Q9UPX8 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
SHANK2Q9UPX8 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHANK2Q9UPX8 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHANK2Q9UPX8 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SHANK2Q9UPX8 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHANK2Q9UPX8 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHANK2Q9UPX8 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHANK2Q9UPX8 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.69□□□□□ -1.5
SHANK2Q9UPX8 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms