Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 OR1L1-202ENST00000373686 1083 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 MIR129-1-201ENST00000384972 72 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 MIR16-1-201ENST00000385271 89 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 RPL7P57-201ENST00000423238 740 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 MOB1AP1-201ENST00000430903 535 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 FHP1-201ENST00000442741 703 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 YWHAQP9-201ENST00000445891 512 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 BTF3P6-201ENST00000448054 499 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 RN7SL481P-201ENST00000477764 299 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 AC008562.1-201ENST00000521763 330 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 AC068831.4-201ENST00000556118 109 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 AC009094.1-201ENST00000564443 426 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 AC127024.5-201ENST00000580085 462 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 BNIP3P24-201ENST00000593398 557 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 AC010503.3-201ENST00000594355 540 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 RPL12P25-202ENST00000598100 674 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 RPL26P30-202ENST00000602923 645 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 NTAN1P1-201ENST00000603150 646 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 AL392112.1-201ENST00000605115 829 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 AC018926.3-201ENST00000618841 406 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 MIR6758-201ENST00000620653 63 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL20A1Q9P218 AC002525.1-201ENST00000624392 1622 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL20A1Q9P218 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL20A1Q9P218 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL20A1Q9P218 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL20A1Q9P218 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL20A1Q9P218 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL20A1Q9P218 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL20A1Q9P218 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL20A1Q9P218 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL20A1Q9P218 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL20A1Q9P218 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 AC139713.2-214ENST00000642059 1811 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL20A1Q9P218 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 AC025263.3-201ENST00000622965 1396 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 TCP11X1-202ENST00000622971 1372 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 MIR659-201ENST00000384963 97 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 AL008987.1-201ENST00000415528 237 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 RPL18P10-201ENST00000425606 538 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 AL732292.1-201ENST00000426692 226 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 HMGB1P48-201ENST00000446155 598 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 ARL2BPP10-201ENST00000446487 531 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 AL354710.1-201ENST00000453641 246 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 AP000563.1-201ENST00000490865 758 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 AC138832.1-201ENST00000522871 556 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 AP001781.1-201ENST00000530977 207 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 AP001317.1-201ENST00000531194 960 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 ZNF321P-202ENST00000550843 495 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL20A1Q9P218 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 AC068714.1-201ENST00000559623 800 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 AGGF1P6-201ENST00000569213 976 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms