Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 RPL10P17-201ENST00000453852 316 ntBASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 RPL23AP37-201ENST00000479658 549 ntBASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 AC005912.1-201ENST00000495392 255 ntBASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 Y_RNA.719-201ENST00000517156 106 ntBASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 RNU6-1028P-201ENST00000517164 93 ntBASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 AC097505.1-201ENST00000610199 565 ntBASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 AC026422.1-201ENST00000623961 452 ntBASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 MTND5P31-201ENST00000419366 1374 ntBASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 AC009643.2-201ENST00000603543 1448 ntBASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
NCKIPSDQ9NZQ3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 RNU6-1339P-201ENST00000363574 91 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 MCTS2P-201ENST00000394552 546 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 ATP5F1P2-201ENST00000398143 760 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 RPS3AP23-201ENST00000401762 784 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 AC092017.2-201ENST00000427600 362 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 DNAJC19P7-201ENST00000428811 344 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 RHEBP2-201ENST00000450289 600 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 Z99714.1-201ENST00000450463 807 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 AL935212.3-201ENST00000450729 284 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 NDUFA12P1-201ENST00000455914 406 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 RNU6-1218P-201ENST00000458990 108 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 RPL6P9-201ENST00000466502 859 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 HPRT1P2-201ENST00000505250 544 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 HMGB1P23-201ENST00000518743 568 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 LRRC6P1-201ENST00000532188 885 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 AP006289.1-201ENST00000538089 277 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 GCSHP4-201ENST00000538792 439 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 AC087897.1-201ENST00000550134 156 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 MTCYBP27-201ENST00000555160 670 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 MTND3P13-201ENST00000574391 343 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 AC008088.1-201ENST00000580993 280 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 RNF138P2-201ENST00000603490 592 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 AC013468.1-201ENST00000608680 598 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 AC092106.3-201ENST00000611308 722 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms