Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PARPBPQ9NWS1 MTCO1P23-201ENST00000415223 1526 ntBASIC5.06□□□□□ -1.6
PARPBPQ9NWS1 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
PARPBPQ9NWS1 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PARPBPQ9NWS1 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PARPBPQ9NWS1 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AC092326.2-201ENST00000624772 1561 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 TMSB4XP4-201ENST00000323496 618 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 RNA5SP46-201ENST00000362370 120 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 RNA5SP394-201ENST00000364216 119 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 RNU1-136P-201ENST00000384181 164 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 RPS3AP23-201ENST00000401762 784 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 GAPDHP42-201ENST00000406848 981 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 RNU6-77P-201ENST00000410554 91 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AC068533.2-201ENST00000411872 306 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 RPL21P32-201ENST00000419877 477 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 MTCYBP24-201ENST00000420387 1106 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AC093155.2-201ENST00000420734 937 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AC009237.2-201ENST00000421358 284 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AC127526.2-201ENST00000426436 775 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 MTND6P12-201ENST00000428247 522 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 RPS29P14-201ENST00000431518 171 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 MTND3P21-201ENST00000433774 331 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AC073109.1-201ENST00000445066 978 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AL672167.3-201ENST00000465951 960 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 PPIAP19-201ENST00000486414 492 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 HMGN2P25-201ENST00000486956 268 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AC073610.1-201ENST00000489971 396 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 DUTP1-201ENST00000493631 470 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AC105252.1-201ENST00000503089 286 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AC138866.2-201ENST00000508650 584 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AC093824.1-201ENST00000508796 343 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AC022483.1-201ENST00000514020 567 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 SNORA43.3-201ENST00000517240 103 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AC112191.2-201ENST00000522428 333 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 IGLV3-30-201ENST00000524362 298 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 OR5AK1P-201ENST00000524837 922 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 CENPUP2-201ENST00000555897 1186 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 GTF2IP8-201ENST00000560687 584 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 MIR3913-1-201ENST00000577744 102 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AC091834.1-201ENST00000614543 472 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AP005264.7-201ENST00000625003 745 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 Z99496.1-201ENST00000469424 1477 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.05□□□□□ -1.6
PARPBPQ9NWS1 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 AC138907.8-201ENST00000623981 2256 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 RNU5F-7P-201ENST00000363696 115 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 RN7SKP292-201ENST00000365522 317 ntBASIC5.04□□□□□ -1.6
PARPBPQ9NWS1 Y_RNA.372-201ENST00000365599 102 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms