Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 COX6CP17-201ENST00000421389 185 ntBASIC5.94□□□□□ -1.46
SSU72Q9NP77 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 RPL7P57-201ENST00000423238 740 ntBASIC5.94□□□□□ -1.46
SSU72Q9NP77 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 RPEP2-201ENST00000432149 701 ntBASIC5.94□□□□□ -1.46
SSU72Q9NP77 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 RPL17P49-201ENST00000443728 411 ntBASIC5.94□□□□□ -1.46
SSU72Q9NP77 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 NIPA2P5-201ENST00000452282 464 ntBASIC5.94□□□□□ -1.46
SSU72Q9NP77 NDUFA5P7-201ENST00000452914 242 ntBASIC5.94□□□□□ -1.46
SSU72Q9NP77 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSU72Q9NP77 MTND1P12-201ENST00000455231 147 ntBASIC5.94□□□□□ -1.46
SSU72Q9NP77 PFN1P6-201ENST00000476786 399 ntBASIC5.94□□□□□ -1.46
SSU72Q9NP77 RPL38P3-201ENST00000484463 213 ntBASIC5.94□□□□□ -1.46
SSU72Q9NP77 RN7SL350P-201ENST00000492591 299 ntBASIC5.94□□□□□ -1.46
SSU72Q9NP77 AC106872.3-201ENST00000495104 446 ntBASIC5.94□□□□□ -1.46
SSU72Q9NP77 AC008629.2-201ENST00000503783 483 ntBASIC5.94□□□□□ -1.46
SSU72Q9NP77 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 AP003181.2-201ENST00000528941 181 ntBASIC5.94□□□□□ -1.46
SSU72Q9NP77 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSU72Q9NP77 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 MIR3187-201ENST00000583431 70 ntBASIC5.94□□□□□ -1.46
SSU72Q9NP77 AC007621.1-201ENST00000604544 437 ntBASIC5.94□□□□□ -1.46
SSU72Q9NP77 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 AC243773.3-201ENST00000613270 256 ntBASIC5.94□□□□□ -1.46
SSU72Q9NP77 MIR6731-201ENST00000614863 72 ntBASIC5.94□□□□□ -1.46
SSU72Q9NP77 AL158801.5-201ENST00000623123 465 ntBASIC5.94□□□□□ -1.46
SSU72Q9NP77 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSU72Q9NP77 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSU72Q9NP77 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSU72Q9NP77 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSU72Q9NP77 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSU72Q9NP77 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
SSU72Q9NP77 AC003973.3-201ENST00000624863 2822 ntBASIC5.93□□□□□ -1.46
SSU72Q9NP77 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SSU72Q9NP77 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
SSU72Q9NP77 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.93□□□□□ -1.46
SSU72Q9NP77 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SSU72Q9NP77 FANCD2P2-201ENST00000437591 1400 ntBASIC5.93□□□□□ -1.46
SSU72Q9NP77 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.93□□□□□ -1.46
SSU72Q9NP77 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SSU72Q9NP77 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SSU72Q9NP77 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SSU72Q9NP77 RNU6-359P-201ENST00000365466 108 ntBASIC5.93□□□□□ -1.46
SSU72Q9NP77 RNU1-149P-201ENST00000390870 161 ntBASIC5.93□□□□□ -1.46
SSU72Q9NP77 AL157702.1-201ENST00000398764 426 ntBASIC5.93□□□□□ -1.46
SSU72Q9NP77 MIR1305-201ENST00000408300 86 ntBASIC5.93□□□□□ -1.46
SSU72Q9NP77 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.93□□□□□ -1.46
SSU72Q9NP77 RNU6-272P-201ENST00000411028 104 ntBASIC5.93□□□□□ -1.46
SSU72Q9NP77 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC5.93□□□□□ -1.46
SSU72Q9NP77 AC133104.1-201ENST00000429100 218 ntBASIC5.93□□□□□ -1.46
SSU72Q9NP77 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.93□□□□□ -1.46
SSU72Q9NP77 AC094019.1-201ENST00000434678 472 ntBASIC5.93□□□□□ -1.46
SSU72Q9NP77 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SSU72Q9NP77 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.93□□□□□ -1.46
SSU72Q9NP77 HMGN1P36-201ENST00000446623 298 ntBASIC5.93□□□□□ -1.46
SSU72Q9NP77 AC022730.1-201ENST00000473114 568 ntBASIC5.93□□□□□ -1.46
SSU72Q9NP77 AC096576.1-201ENST00000489014 359 ntBASIC5.93□□□□□ -1.46
SSU72Q9NP77 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.93□□□□□ -1.46
SSU72Q9NP77 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC5.93□□□□□ -1.46
SSU72Q9NP77 MTND6P2-201ENST00000512226 524 ntBASIC5.93□□□□□ -1.46
SSU72Q9NP77 Y_RNA.672-201ENST00000516289 104 ntBASIC5.93□□□□□ -1.46
SSU72Q9NP77 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.93□□□□□ -1.46
SSU72Q9NP77 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.93□□□□□ -1.46
SSU72Q9NP77 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.93□□□□□ -1.46
SSU72Q9NP77 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.93□□□□□ -1.46
SSU72Q9NP77 AC090502.2-201ENST00000549267 280 ntBASIC5.93□□□□□ -1.46
SSU72Q9NP77 AC087477.6-201ENST00000559595 843 ntBASIC5.93□□□□□ -1.46
SSU72Q9NP77 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.93□□□□□ -1.46
SSU72Q9NP77 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.93□□□□□ -1.46
SSU72Q9NP77 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.93□□□□□ -1.46
SSU72Q9NP77 AC011712.1-201ENST00000588959 234 ntBASIC5.93□□□□□ -1.46
SSU72Q9NP77 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.93□□□□□ -1.46
SSU72Q9NP77 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.93□□□□□ -1.46
SSU72Q9NP77 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SSU72Q9NP77 AP001823.1-201ENST00000604056 1003 ntBASIC5.93□□□□□ -1.46
SSU72Q9NP77 AC013553.2-201ENST00000604244 589 ntBASIC5.93□□□□□ -1.46
SSU72Q9NP77 AC009027.1-201ENST00000604510 479 ntBASIC5.93□□□□□ -1.46
SSU72Q9NP77 AC011891.2-201ENST00000604949 397 ntBASIC5.93□□□□□ -1.46
SSU72Q9NP77 uc_338.26-201ENST00000612659 160 ntBASIC5.93□□□□□ -1.46
SSU72Q9NP77 MIR6811-201ENST00000620409 58 ntBASIC5.93□□□□□ -1.46
SSU72Q9NP77 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.93□□□□□ -1.46
SSU72Q9NP77 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms