Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CD248Q9HCU0 AP001642.1-201ENST00000624727 2117 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CD248Q9HCU0 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD248Q9HCU0 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CD248Q9HCU0 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 GAPDHP24-201ENST00000328713 983 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 Y_RNA.813-201ENST00000364639 102 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CD248Q9HCU0 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 AC005042.1-201ENST00000393397 800 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 OR4K6P-201ENST00000416478 897 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 AC114755.5-201ENST00000447760 831 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 EPS15P1-201ENST00000448836 336 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 GTF2IP12-201ENST00000456547 356 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 RPL7P1-201ENST00000468161 747 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 RPL7P9-201ENST00000468715 747 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 SETP11-201ENST00000473027 690 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 RN7SL826P-201ENST00000479724 288 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 HMGB1P36-201ENST00000487709 576 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 AC072052.1-201ENST00000496556 306 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 AC114781.4-201ENST00000513707 639 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 CDC42P3-201ENST00000518493 633 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 NPM1P6-201ENST00000521088 871 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 AP001317.1-201ENST00000531194 960 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 UBE2NP1-201ENST00000545592 458 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 AC084757.1-201ENST00000559987 490 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 AADACP1-206ENST00000561502 1193 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 AC127024.5-201ENST00000580085 462 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 VN1R92P-201ENST00000598511 928 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 AC013476.2-201ENST00000614456 459 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 AC037198.3-201ENST00000616754 526 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 AC015908.5-201ENST00000623289 343 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 AC099654.12-201ENST00000639868 649 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 LINC01808-202ENST00000641680 1116 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD248Q9HCU0 AC090971.4-201ENST00000560291 1800 ntBASIC5.66□□□□□ -1.5
CD248Q9HCU0 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD248Q9HCU0 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD248Q9HCU0 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD248Q9HCU0 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
CD248Q9HCU0 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.65□□□□□ -1.5
CD248Q9HCU0 AC000374.1-201ENST00000434698 1745 ntBASIC5.65□□□□□ -1.5
CD248Q9HCU0 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.65□□□□□ -1.5
CD248Q9HCU0 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.65□□□□□ -1.5
CD248Q9HCU0 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CD248Q9HCU0 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
CD248Q9HCU0 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CD248Q9HCU0 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CD248Q9HCU0 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.65□□□□□ -1.5
CD248Q9HCU0 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.65□□□□□ -1.5
CD248Q9HCU0 AC016716.1-201ENST00000265882 708 ntBASIC5.65□□□□□ -1.5
CD248Q9HCU0 AL672167.1-206ENST00000356293 943 ntBASIC5.65□□□□□ -1.5
CD248Q9HCU0 RNA5SP335-201ENST00000363817 110 ntBASIC5.65□□□□□ -1.5
CD248Q9HCU0 RNU4-2-201ENST00000365668 141 ntBASIC5.65□□□□□ -1.5
CD248Q9HCU0 RNU6-225P-201ENST00000384613 103 ntBASIC5.65□□□□□ -1.5
CD248Q9HCU0 RNU6-1011P-201ENST00000384668 107 ntBASIC5.65□□□□□ -1.5
CD248Q9HCU0 AL645927.1-201ENST00000396783 406 ntBASIC5.65□□□□□ -1.5
CD248Q9HCU0 AL512430.2-201ENST00000406786 339 ntBASIC5.65□□□□□ -1.5
CD248Q9HCU0 BTF3P7-201ENST00000407097 488 ntBASIC5.65□□□□□ -1.5
CD248Q9HCU0 RN7SKP33-201ENST00000410942 340 ntBASIC5.65□□□□□ -1.5
CD248Q9HCU0 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.65□□□□□ -1.5
CD248Q9HCU0 RPS6P23-201ENST00000413224 722 ntBASIC5.65□□□□□ -1.5
CD248Q9HCU0 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.65□□□□□ -1.5
CD248Q9HCU0 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.65□□□□□ -1.5
CD248Q9HCU0 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.65□□□□□ -1.5
CD248Q9HCU0 USP9YP31-201ENST00000431405 881 ntBASIC5.65□□□□□ -1.5
CD248Q9HCU0 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.65□□□□□ -1.5
CD248Q9HCU0 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.65□□□□□ -1.5
CD248Q9HCU0 RPL34P6-201ENST00000432390 345 ntBASIC5.65□□□□□ -1.5
CD248Q9HCU0 AL353597.2-202ENST00000434901 373 ntBASIC5.65□□□□□ -1.5
CD248Q9HCU0 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms