Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.28□□□□□ -1.72
LRRC40Q9H9A6 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.73
LRRC40Q9H9A6 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.73
LRRC40Q9H9A6 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 RNU1-87P-201ENST00000363727 170 ntBASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 SNORA27.3-201ENST00000364937 134 ntBASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 GCNT6-201ENST00000379591 934 ntBASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 AL590290.1-201ENST00000405336 380 ntBASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 AL603766.1-201ENST00000407763 664 ntBASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 NRBF2P2-201ENST00000413087 861 ntBASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 RANP4-201ENST00000413361 655 ntBASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 RPL23AP46-201ENST00000438548 490 ntBASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 ELOCP8-201ENST00000439309 332 ntBASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 ELOCP15-201ENST00000442090 332 ntBASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 AC013356.1-201ENST00000489027 564 ntBASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 RN7SL691P-201ENST00000494487 301 ntBASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 FTH1P24-201ENST00000503502 462 ntBASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 MTATP6P22-201ENST00000507369 598 ntBASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 RNA5SP49-201ENST00000516450 115 ntBASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 RNA5SP519-201ENST00000516480 119 ntBASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 OR1AB1P-201ENST00000585564 761 ntBASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 AL356121.2-201ENST00000624715 780 ntBASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 AL139254.3-201ENST00000641097 674 ntBASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LRRC40Q9H9A6 AL136964.1-201ENST00000622038 2990 ntBASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 RNA5SP502-201ENST00000362694 119 ntBASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 RN7SKP44-201ENST00000363602 316 ntBASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 SNORD74.4-201ENST00000364129 80 ntBASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 MTND2P15-201ENST00000418575 892 ntBASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 AC245028.1-201ENST00000423259 256 ntBASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 BX119904.1-201ENST00000432026 348 ntBASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 RPS3AP54-201ENST00000435535 734 ntBASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 RPS29P33-201ENST00000456717 146 ntBASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 AP000926.1-201ENST00000479573 241 ntBASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 RPS6P4-201ENST00000494693 758 ntBASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 KCTD9P2-201ENST00000512203 1013 ntBASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 IGKV2-36-201ENST00000519999 223 ntBASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 AL109741.3-201ENST00000561748 592 ntBASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 PCNAP1-202ENST00000595299 752 ntBASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 AL356218.2-201ENST00000605264 187 ntBASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 AC010680.4-201ENST00000605334 543 ntBASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 GTF2H2B-203ENST00000508065 1432 ntBASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 AC016588.2-201ENST00000632484 3021 ntBASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LRRC40Q9H9A6 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms