Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS11Q9H270 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS11Q9H270 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS11Q9H270 SNORA64.1-201ENST00000362600 132 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 RNU4-21P-201ENST00000362802 126 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 SNORA72.1-201ENST00000363485 129 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VPS11Q9H270 MTCO1P56-201ENST00000401674 224 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 MIR1203-201ENST00000408812 85 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 AC099535.1-201ENST00000408928 371 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS11Q9H270 BTF3P8-201ENST00000414577 526 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.5□□□□□ -1.53
VPS11Q9H270 AC007161.1-204ENST00000423039 460 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS11Q9H270 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.5□□□□□ -1.53
VPS11Q9H270 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.5□□□□□ -1.53
VPS11Q9H270 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 AC006335.2-201ENST00000437993 330 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 AL354941.1-201ENST00000438600 464 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS11Q9H270 GTF3AP5-201ENST00000442645 697 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 AL591623.2-201ENST00000449978 222 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS11Q9H270 RPL5P22-201ENST00000480199 884 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 AC073522.1-201ENST00000483312 377 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS11Q9H270 RN7SL649P-201ENST00000496974 275 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS11Q9H270 LSM3P4-201ENST00000502948 309 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 IGBP1P4-201ENST00000503202 879 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS11Q9H270 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS11Q9H270 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS11Q9H270 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS11Q9H270 SCARNA20.4-201ENST00000516969 131 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 RN7SKP183-201ENST00000517169 324 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 CDC42P3-201ENST00000518493 633 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS11Q9H270 YWHABP2-201ENST00000540201 713 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS11Q9H270 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS11Q9H270 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS11Q9H270 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.5□□□□□ -1.53
VPS11Q9H270 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS11Q9H270 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS11Q9H270 MTCO3P13-201ENST00000577757 781 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS11Q9H270 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.5□□□□□ -1.53
VPS11Q9H270 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS11Q9H270 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS11Q9H270 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS11Q9H270 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS11Q9H270 AL355816.1-201ENST00000607951 118 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 AL391497.1-201ENST00000608671 547 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 AC107075.1-201ENST00000613695 314 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 AC063943.3-201ENST00000615562 356 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 AL121873.1-201ENST00000616013 524 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 MIR6806-201ENST00000622141 64 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 AC109454.4-201ENST00000623411 649 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
VPS11Q9H270 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS11Q9H270 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS11Q9H270 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS11Q9H270 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS11Q9H270 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS11Q9H270 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS11Q9H270 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS11Q9H270 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
VPS11Q9H270 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS11Q9H270 AC005332.5-201ENST00000591222 2919 ntBASIC5.5□□□□□ -1.53
VPS11Q9H270 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
VPS11Q9H270 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS11Q9H270 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS11Q9H270 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS11Q9H270 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS11Q9H270 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VPS11Q9H270 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
VPS11Q9H270 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS11Q9H270 AC092162.3-201ENST00000624511 1624 ntBASIC5.49□□□□□ -1.53
VPS11Q9H270 AC087359.1-201ENST00000508335 1740 ntBASIC5.49□□□□□ -1.53
VPS11Q9H270 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
VPS11Q9H270 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS11Q9H270 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS11Q9H270 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VPS11Q9H270 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
VPS11Q9H270 RNU1-150P-201ENST00000362491 162 ntBASIC5.49□□□□□ -1.53
VPS11Q9H270 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS11Q9H270 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS11Q9H270 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS11Q9H270 NCSTNP1-201ENST00000406229 144 ntBASIC5.49□□□□□ -1.53
VPS11Q9H270 AL512430.2-201ENST00000406786 339 ntBASIC5.49□□□□□ -1.53
VPS11Q9H270 USP9YP6-201ENST00000413550 854 ntBASIC5.49□□□□□ -1.53
VPS11Q9H270 AL121878.1-201ENST00000418638 859 ntBASIC5.49□□□□□ -1.53
VPS11Q9H270 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS11Q9H270 GAPDHP49-201ENST00000421421 961 ntBASIC5.49□□□□□ -1.53
VPS11Q9H270 NPM1P24-201ENST00000428039 894 ntBASIC5.49□□□□□ -1.53
VPS11Q9H270 KCTD9P1-201ENST00000430462 1167 ntBASIC5.49□□□□□ -1.53
VPS11Q9H270 USP12PX-201ENST00000432383 1057 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms