Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 EEF1B2P5-201ENST00000444820 548 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 MTND2P4-201ENST00000445034 1004 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AC092754.2-201ENST00000463506 460 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 RN7SL174P-201ENST00000475578 289 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 UBA52P3-201ENST00000491303 382 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 RPS4XP20-201ENST00000505751 772 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AC138915.2-201ENST00000569776 97 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AL590229.1-201ENST00000603497 542 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AC004223.4-201ENST00000612426 332 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AL136981.2-201ENST00000617319 734 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AC243756.2-201ENST00000618406 463 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AC118658.2-201ENST00000618697 459 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AF246928.1-201ENST00000623768 87 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AC100778.3-201ENST00000580060 1750 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 AC004817.4-201ENST00000602396 3625 ntBASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM54Q9BYV2 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 VDAC2P1-201ENST00000399358 958 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 AL389925.1-201ENST00000432257 728 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 AC118469.1-201ENST00000442943 488 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 RAB11AP1-201ENST00000442978 646 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 AL591363.1-201ENST00000450091 483 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 NF1P3-201ENST00000457709 450 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 RNU6-488P-201ENST00000515918 99 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 RNA5SP362-201ENST00000516048 118 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 RNU6-678P-201ENST00000516832 109 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 RN7SKP96-201ENST00000516948 297 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 RNA5SP373-201ENST00000517271 95 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 AP006245.2-201ENST00000522004 300 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 AC084824.1-201ENST00000550917 1005 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 MIR4472-2-201ENST00000582069 67 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 AC011445.2-201ENST00000599274 173 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 AC069307.1-201ENST00000602820 447 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 AC008814.1-201ENST00000603797 406 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 AC010738.1-201ENST00000604970 987 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 AP001005.3-201ENST00000622049 129 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 AP000756.2-201ENST00000624168 2567 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 AC025125.1-201ENST00000624743 1922 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 CDR1-202ENST00000625883 1485 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 CYP4F35P-202ENST00000636121 390 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 CASC19-264ENST00000641912 1184 ntBASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM54Q9BYV2 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms