Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 UBE2Q2P2-203ENST00000613592 761 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 AC010149.2-201ENST00000637608 315 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 IQCB2P-201ENST00000401788 1633 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 RBPJP7-201ENST00000442803 1447 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 RBPJP5-201ENST00000449433 1447 ntBASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
TRAIPQ9BWF2 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 MTND5P26-201ENST00000426018 1752 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 RNA5SP477-201ENST00000362639 119 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 RNU6-343P-201ENST00000364709 104 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 RNY4P34-201ENST00000364779 95 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 PEX12P1-201ENST00000400284 1048 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 RNA5SP156-201ENST00000410250 110 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 RN7SKP161-201ENST00000411110 305 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 RPL35AP31-201ENST00000418340 337 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 CYP4F30P-202ENST00000420048 405 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 ISCA1P1-201ENST00000426679 387 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 RPS27AP6-201ENST00000427962 448 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 TPT1P13-201ENST00000449760 499 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 AC092865.4-201ENST00000477936 615 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 RPSAP51-201ENST00000497462 645 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 AC093677.1-201ENST00000514414 678 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 AL671862.1-201ENST00000515851 349 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 SCARNA18.1-201ENST00000516330 83 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 Y_RNA.710-201ENST00000516975 110 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 ZNF519P2-201ENST00000557032 169 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 AC006960.3-201ENST00000561845 705 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 AL157394.1-201ENST00000562983 1224 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 OR10AB1P-201ENST00000609613 938 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 RFPL4AP6-201ENST00000616792 846 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 AL596245.1-201ENST00000618994 362 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 AC095031.1-201ENST00000623685 672 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 SNX18P12-201ENST00000624821 759 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 AC011369.2-201ENST00000624423 1567 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 AC092125.1-201ENST00000562568 1995 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 ZNF652P1-201ENST00000442420 1309 ntBASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRAIPQ9BWF2 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 AC093849.1-201ENST00000563631 2209 ntBASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 FRG1BP-201ENST00000278882 761 ntBASIC6.72□□□□□ -1.33
TRAIPQ9BWF2 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms