Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.21□□□□□ -1.26
PHOX2BQ99453 MIR4502-201ENST00000580432 81 ntBASIC7.21□□□□□ -1.26
PHOX2BQ99453 AC008521.2-201ENST00000591021 259 ntBASIC7.21□□□□□ -1.26
PHOX2BQ99453 AC063977.7-201ENST00000594454 337 ntBASIC7.21□□□□□ -1.26
PHOX2BQ99453 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC7.21□□□□□ -1.26
PHOX2BQ99453 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC7.21□□□□□ -1.26
PHOX2BQ99453 PISRT1.1-201ENST00000616930 107 ntBASIC7.21□□□□□ -1.26
PHOX2BQ99453 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PHOX2BQ99453 AC092821.3-202ENST00000641304 2767 ntBASIC7.21□□□□□ -1.26
PHOX2BQ99453 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC7.21□□□□□ -1.26
PHOX2BQ99453 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.21□□□□□ -1.26
PHOX2BQ99453 AL442639.1-201ENST00000625030 1899 ntBASIC7.21□□□□□ -1.26
PHOX2BQ99453 AL117339.4-201ENST00000608335 7063 ntBASIC7.21□□□□□ -1.26
PHOX2BQ99453 AC104162.1-201ENST00000430831 2382 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 AC091544.5-201ENST00000620192 3815 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 AC130650.2-201ENST00000618736 2403 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.2□□□□□ -1.26
PHOX2BQ99453 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
PHOX2BQ99453 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PHOX2BQ99453 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PHOX2BQ99453 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
PHOX2BQ99453 MFSD8-217ENST00000641178 4374 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PHOX2BQ99453 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
PHOX2BQ99453 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.2□□□□□ -1.26
PHOX2BQ99453 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
PHOX2BQ99453 RNU6-1252P-201ENST00000363054 104 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 RN7SKP130-201ENST00000364924 301 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 MIR19A-201ENST00000384878 82 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
PHOX2BQ99453 AL031985.1-201ENST00000392713 418 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 RNU4-6P-201ENST00000410804 122 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 RNU4-46P-201ENST00000410818 138 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 Y_RNA.646-201ENST00000410980 101 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 PDSS1P1-201ENST00000422953 1114 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 AL451139.1-201ENST00000434718 346 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.2□□□□□ -1.26
PHOX2BQ99453 NDUFS5P2-201ENST00000484004 306 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 AC005912.1-201ENST00000495392 255 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 AC068305.1-201ENST00000497406 726 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 AC110794.1-201ENST00000505816 425 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 AC093853.1-201ENST00000515689 483 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 IGKV2D-38-201ENST00000518423 240 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 IGLVIV-59-201ENST00000520218 250 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
PHOX2BQ99453 AC027544.3-201ENST00000535082 757 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
PHOX2BQ99453 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.2□□□□□ -1.26
PHOX2BQ99453 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.2□□□□□ -1.26
PHOX2BQ99453 BNIP3P16-201ENST00000589779 534 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PHOX2BQ99453 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.2□□□□□ -1.26
PHOX2BQ99453 AC073539.2-201ENST00000597113 165 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.2□□□□□ -1.26
PHOX2BQ99453 AL121612.2-201ENST00000612261 482 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 SNORA43.5-201ENST00000631270 138 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 AC055839.1-201ENST00000634467 498 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PHOX2BQ99453 AC011416.1-201ENST00000514947 1732 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PHOX2BQ99453 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PHOX2BQ99453 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
PHOX2BQ99453 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PHOX2BQ99453 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PHOX2BQ99453 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.2□□□□□ -1.26
PHOX2BQ99453 AC090643.1-201ENST00000623600 3100 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
PHOX2BQ99453 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PHOX2BQ99453 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
PHOX2BQ99453 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
PHOX2BQ99453 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
PHOX2BQ99453 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.2□□□□□ -1.26
PHOX2BQ99453 EEF1A1P26-201ENST00000458319 1363 ntBASIC7.2□□□□□ -1.26
PHOX2BQ99453 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
PHOX2BQ99453 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC7.19□□□□□ -1.26
PHOX2BQ99453 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC7.19□□□□□ -1.26
PHOX2BQ99453 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
PHOX2BQ99453 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.19□□□□□ -1.26
PHOX2BQ99453 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.19□□□□□ -1.26
PHOX2BQ99453 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PHOX2BQ99453 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PHOX2BQ99453 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC7.19□□□□□ -1.26
PHOX2BQ99453 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.19□□□□□ -1.26
PHOX2BQ99453 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
PHOX2BQ99453 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC7.19□□□□□ -1.26
PHOX2BQ99453 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
PHOX2BQ99453 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.19□□□□□ -1.26
PHOX2BQ99453 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PHOX2BQ99453 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PHOX2BQ99453 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PHOX2BQ99453 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PHOX2BQ99453 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.19□□□□□ -1.26
PHOX2BQ99453 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC7.19□□□□□ -1.26
PHOX2BQ99453 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC7.19□□□□□ -1.26
PHOX2BQ99453 RNU6-511P-201ENST00000363496 107 ntBASIC7.19□□□□□ -1.26
PHOX2BQ99453 RNA5SP23-201ENST00000391006 105 ntBASIC7.19□□□□□ -1.26
PHOX2BQ99453 AC105402.2-201ENST00000438503 358 ntBASIC7.19□□□□□ -1.26
PHOX2BQ99453 GAPDHP37-201ENST00000442317 968 ntBASIC7.19□□□□□ -1.26
PHOX2BQ99453 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.19□□□□□ -1.26
PHOX2BQ99453 RPL21P89-201ENST00000444021 467 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms