Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP47Q96K76 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP47Q96K76 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
USP47Q96K76 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.38□□□□□ -1.55
USP47Q96K76 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
USP47Q96K76 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
USP47Q96K76 RNA5SP39-201ENST00000411245 120 ntBASIC5.38□□□□□ -1.55
USP47Q96K76 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.38□□□□□ -1.55
USP47Q96K76 AL139247.1-201ENST00000422768 325 ntBASIC5.38□□□□□ -1.55
USP47Q96K76 RPSAP41-201ENST00000439695 860 ntBASIC5.38□□□□□ -1.55
USP47Q96K76 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.38□□□□□ -1.55
USP47Q96K76 HNRNPKP5-201ENST00000515300 253 ntBASIC5.38□□□□□ -1.55
USP47Q96K76 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.38□□□□□ -1.55
USP47Q96K76 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5.38□□□□□ -1.55
USP47Q96K76 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.38□□□□□ -1.55
USP47Q96K76 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.38□□□□□ -1.55
USP47Q96K76 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.38□□□□□ -1.55
USP47Q96K76 MRPS35P3-201ENST00000603189 709 ntBASIC5.38□□□□□ -1.55
USP47Q96K76 AL137849.1-201ENST00000604767 169 ntBASIC5.38□□□□□ -1.55
USP47Q96K76 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.38□□□□□ -1.55
USP47Q96K76 AC233309.1-201ENST00000619522 751 ntBASIC5.38□□□□□ -1.55
USP47Q96K76 AC091953.5-201ENST00000622919 233 ntBASIC5.38□□□□□ -1.55
USP47Q96K76 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.38□□□□□ -1.55
USP47Q96K76 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
USP47Q96K76 AC068254.2-201ENST00000623938 3577 ntBASIC5.38□□□□□ -1.55
USP47Q96K76 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
USP47Q96K76 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.37□□□□□ -1.55
USP47Q96K76 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP47Q96K76 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
USP47Q96K76 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.37□□□□□ -1.55
USP47Q96K76 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USP47Q96K76 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.37□□□□□ -1.55
USP47Q96K76 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USP47Q96K76 BDP1P-201ENST00000582658 1990 ntBASIC5.37□□□□□ -1.55
USP47Q96K76 RN7SKP156-201ENST00000410308 342 ntBASIC5.37□□□□□ -1.55
USP47Q96K76 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.37□□□□□ -1.55
USP47Q96K76 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.37□□□□□ -1.55
USP47Q96K76 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.37□□□□□ -1.55
USP47Q96K76 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USP47Q96K76 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.37□□□□□ -1.55
USP47Q96K76 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.37□□□□□ -1.55
USP47Q96K76 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.37□□□□□ -1.55
USP47Q96K76 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.37□□□□□ -1.55
USP47Q96K76 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USP47Q96K76 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.37□□□□□ -1.55
USP47Q96K76 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.37□□□□□ -1.55
USP47Q96K76 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP47Q96K76 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP47Q96K76 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP47Q96K76 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP47Q96K76 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP47Q96K76 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.37□□□□□ -1.55
USP47Q96K76 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.37□□□□□ -1.55
USP47Q96K76 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP47Q96K76 LINC01109-201ENST00000603837 3081 ntBASIC5.37□□□□□ -1.55
USP47Q96K76 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USP47Q96K76 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USP47Q96K76 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
USP47Q96K76 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
USP47Q96K76 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
USP47Q96K76 NANOGP6-201ENST00000429190 847 ntBASIC5.36□□□□□ -1.55
USP47Q96K76 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.36□□□□□ -1.55
USP47Q96K76 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.36□□□□□ -1.55
USP47Q96K76 SNORA71B-202ENST00000439232 272 ntBASIC5.36□□□□□ -1.55
USP47Q96K76 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.36□□□□□ -1.55
USP47Q96K76 RN7SKP141-201ENST00000516167 338 ntBASIC5.36□□□□□ -1.55
USP47Q96K76 AC022695.1-201ENST00000522089 237 ntBASIC5.36□□□□□ -1.55
USP47Q96K76 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.36□□□□□ -1.55
USP47Q96K76 SETP1-201ENST00000556014 845 ntBASIC5.36□□□□□ -1.55
USP47Q96K76 AC007179.3-201ENST00000604976 235 ntBASIC5.36□□□□□ -1.55
USP47Q96K76 BNIP3P19-201ENST00000605397 577 ntBASIC5.36□□□□□ -1.55
USP47Q96K76 SNORA62.6-201ENST00000606322 83 ntBASIC5.36□□□□□ -1.55
USP47Q96K76 AC005344.1-201ENST00000613391 459 ntBASIC5.36□□□□□ -1.55
USP47Q96K76 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.36□□□□□ -1.55
USP47Q96K76 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
USP47Q96K76 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
USP47Q96K76 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
USP47Q96K76 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
USP47Q96K76 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
USP47Q96K76 MAPK10-372ENST00000641954 3413 ntBASIC5.36□□□□□ -1.55
USP47Q96K76 CDY11P-201ENST00000447168 1651 ntBASIC5.36□□□□□ -1.55
USP47Q96K76 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
USP47Q96K76 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
USP47Q96K76 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
USP47Q96K76 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
USP47Q96K76 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USP47Q96K76 MIR448-201ENST00000362131 111 ntBASIC5.35□□□□□ -1.55
USP47Q96K76 SNORA9-201ENST00000384215 133 ntBASIC5.35□□□□□ -1.55
USP47Q96K76 MIR483-201ENST00000385070 76 ntBASIC5.35□□□□□ -1.55
USP47Q96K76 AC007066.1-201ENST00000392902 381 ntBASIC5.35□□□□□ -1.55
USP47Q96K76 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.35□□□□□ -1.55
USP47Q96K76 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.35□□□□□ -1.55
USP47Q96K76 AL591419.1-201ENST00000427423 339 ntBASIC5.35□□□□□ -1.55
USP47Q96K76 UBDP1-202ENST00000457888 382 ntBASIC5.35□□□□□ -1.55
USP47Q96K76 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.35□□□□□ -1.55
USP47Q96K76 AC109458.1-201ENST00000508858 316 ntBASIC5.35□□□□□ -1.55
USP47Q96K76 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.35□□□□□ -1.55
USP47Q96K76 AC026403.1-201ENST00000518938 295 ntBASIC5.35□□□□□ -1.55
USP47Q96K76 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.35□□□□□ -1.55
USP47Q96K76 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms