Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 BNIP3P19-201ENST00000605397 577 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 FRG1HP-204ENST00000617940 757 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 AC008432.1-201ENST00000615912 1320 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 AC017007.4-201ENST00000503353 1352 ntBASIC4.4□□□□□ -1.71
PDLIM5Q96HC4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 RNU6-543P-201ENST00000362576 108 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 RNU6-792P-201ENST00000363490 107 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 RNU6-1005P-201ENST00000384519 107 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 MIR124-3-201ENST00000384866 87 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 MIR659-201ENST00000384963 97 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 AL160275.2-201ENST00000412010 394 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 PRELID3BP11-201ENST00000414230 479 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 AC007394.1-201ENST00000421941 531 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 HSFY1P1-201ENST00000423928 1178 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 SKP1P3-201ENST00000429280 487 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 RPL12P20-201ENST00000475538 479 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 AC083982.1-201ENST00000485679 344 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 AC104629.1-201ENST00000494226 508 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 AC010374.1-201ENST00000503762 1237 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 AC027338.1-201ENST00000514840 825 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 RNA5SP497-201ENST00000516081 97 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 MIR4270-201ENST00000581799 70 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 MIR4480-201ENST00000582492 71 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 AC245100.7-201ENST00000609678 442 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 AL163051.2-201ENST00000618976 735 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 AC091953.3-201ENST00000623220 236 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 LINC01808-202ENST00000641680 1116 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 AC104446.1-201ENST00000613728 1321 ntBASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM5Q96HC4 DHX40P1-201ENST00000588725 1412 ntBASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 AC006971.1-201ENST00000407916 4486 ntBASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 AL512646.1-201ENST00000269395 1077 ntBASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 OR4K15-201ENST00000305051 1216 ntBASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 RNU1-108P-201ENST00000362556 161 ntBASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 SNORA58B-201ENST00000364259 136 ntBASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 RNU6-609P-201ENST00000365459 107 ntBASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 RPL31P45-201ENST00000419532 356 ntBASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 RPS12P23-201ENST00000419579 400 ntBASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 OR2X1P-201ENST00000421144 687 ntBASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 CENPIP1-201ENST00000425713 902 ntBASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 CEACAMP6-201ENST00000452007 574 ntBASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 AC053481.1-201ENST00000467217 306 ntBASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 RN7SL205P-201ENST00000490174 284 ntBASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 AC083829.1-201ENST00000503756 657 ntBASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 AC015795.1-201ENST00000513669 327 ntBASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 HMGN1P15-201ENST00000513870 295 ntBASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 AP001781.1-201ENST00000530977 207 ntBASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 MTND5P21-201ENST00000531961 522 ntBASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 AC022882.1-201ENST00000532142 501 ntBASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 AC139103.1-201ENST00000534696 1030 ntBASIC4.38□□□□□ -1.71
PDLIM5Q96HC4 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms