Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC012339.2-201ENST00000523996 453 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 UBTFL10-201ENST00000528532 562 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 AC008033.2-201ENST00000542626 177 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 AL390726.5-202ENST00000564800 256 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 TVP23CP2-201ENST00000571473 623 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 MIR4666A-201ENST00000580160 79 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 RN7SL435P-201ENST00000584418 282 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 AC091057.2-201ENST00000602594 792 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 AL049794.2-201ENST00000616301 365 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 AL158163.2-201ENST00000619110 700 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 CR392039.4-201ENST00000624968 501 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 snoZ40.1-201ENST00000364540 72 ntBASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 AC013442.1-201ENST00000397347 228 ntBASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 TMSB4XP8-201ENST00000402089 135 ntBASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 TMSB4XP6-201ENST00000415187 135 ntBASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 COX6B1P1-201ENST00000415962 213 ntBASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 TMSB4XP1-201ENST00000424567 135 ntBASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 AC006466.1-201ENST00000438721 289 ntBASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 AC233982.1-201ENST00000451247 436 ntBASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 USP9YP25-201ENST00000457708 443 ntBASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 AC063943.1-201ENST00000465434 453 ntBASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 AC015724.1-201ENST00000478577 156 ntBASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 RPL7P16-201ENST00000479738 738 ntBASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 MTCO2P15-201ENST00000532655 656 ntBASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 AL442163.2-201ENST00000553912 710 ntBASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 AL049539.1-201ENST00000611964 459 ntBASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 MTND4P8-201ENST00000514997 1362 ntBASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 DHX9P1-201ENST00000436565 3076 ntBASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 LINC01109-201ENST00000603837 3081 ntBASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CHMP4CQ96CF2 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 ECM1P2-201ENST00000503354 1577 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 SAMMSON-226ENST00000642089 1582 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 SCN1A-220ENST00000641603 12506 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 RNU6-707P-201ENST00000364647 95 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 SFR1P1-201ENST00000403720 688 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 GSTA8P-201ENST00000404253 637 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 OR51A3P-201ENST00000413596 924 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 VPS26BP1-201ENST00000417155 755 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 QRSL1P2-201ENST00000418582 964 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 NPM1P24-201ENST00000428039 894 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 ELOCP10-201ENST00000440624 327 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 Z77249.1-201ENST00000444622 1175 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 HMGB1P16-201ENST00000447155 540 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 AC231760.1-201ENST00000498002 260 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 AC034244.1-201ENST00000507687 207 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 RN7SKP46-201ENST00000515942 234 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms