Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AL133477.1-201ENST00000457472 514 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 ELOCP12-201ENST00000458706 328 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 RPL9P32-201ENST00000464118 620 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 AC109327.1-201ENST00000471666 403 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 STRADBP1-201ENST00000478954 1281 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 RN7SL205P-201ENST00000490174 284 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 RN7SL691P-201ENST00000494487 301 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 HMGB1P21-201ENST00000502313 581 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 NDUFB4P9-201ENST00000511646 388 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 AC091515.1-201ENST00000548110 679 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 AC009101.1-201ENST00000568135 242 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 AC007599.1-201ENST00000568688 1174 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 AC022655.2-201ENST00000577280 318 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 SS18L2P2-201ENST00000583960 235 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 AC068020.1-201ENST00000594215 661 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 AC110741.2-201ENST00000605278 268 ntBASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLHC1Q8NHS4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.77
CLHC1Q8NHS4 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
CLHC1Q8NHS4 MAPK10-253ENST00000641010 4072 ntBASIC3.96□□□□□ -1.77
CLHC1Q8NHS4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
CLHC1Q8NHS4 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
CLHC1Q8NHS4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 AC139713.2-214ENST00000642059 1811 ntBASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 MAPK10-372ENST00000641954 3413 ntBASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 PRELID3BP11-201ENST00000414230 479 ntBASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 P2RY10P2-201ENST00000416730 913 ntBASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 RPS29P17-201ENST00000430795 166 ntBASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 YWHAEP5-201ENST00000431545 765 ntBASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 MTCO1P52-201ENST00000433928 531 ntBASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 TVP23BP2-201ENST00000455082 615 ntBASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 RPL5P13-201ENST00000462840 709 ntBASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 RPL35P6-201ENST00000490024 372 ntBASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 AC093824.1-201ENST00000508796 343 ntBASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 AC008958.1-201ENST00000511047 682 ntBASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 CDH12P4-201ENST00000517835 295 ntBASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 CDH12P3-201ENST00000517935 295 ntBASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 CDH12P1-201ENST00000518435 295 ntBASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 RPL23AP87-202ENST00000573039 466 ntBASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 AC090246.1-201ENST00000616499 426 ntBASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 RPL23AP61-201ENST00000623642 466 ntBASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLHC1Q8NHS4 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 DCAF13P1-201ENST00000495256 1330 ntBASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 RPL31P45-201ENST00000419532 356 ntBASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 PTP4A1P5-201ENST00000420305 455 ntBASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 RPL23AP46-201ENST00000438548 490 ntBASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 CBX1P1-201ENST00000440184 427 ntBASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 HMGN2P7-201ENST00000456186 273 ntBASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 KRT19P6-201ENST00000510983 209 ntBASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms