Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 5S_rRNA.16-201ENST00000612928 119 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AL391261.4-201ENST00000616012 481 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC090246.1-201ENST00000616499 426 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AL050321.1-201ENST00000432363 400 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 RPL21P89-201ENST00000444021 467 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 CASC19-203ENST00000523510 575 ntTSL 3 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC022655.2-201ENST00000577280 318 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC019176.2-201ENST00000611579 315 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 DOCK11P1-201ENST00000553480 5932 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 CAB39P1-201ENST00000502277 460 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC093853.1-201ENST00000515689 483 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC244517.3-201ENST00000616254 1235 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 CASC19-261ENST00000641853 1638 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AL352979.3-201ENST00000553515 247 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC091167.4-201ENST00000605079 184 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 SAMMSON-213ENST00000641336 1521 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 MAPK10-286ENST00000641208 8747 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC027290.2-201ENST00000623210 18662 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AL139247.1-201ENST00000422768 325 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 RPS26P24-201ENST00000497656 331 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC100770.1-201ENST00000532310 322 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC012417.1-201ENST00000582307 1039 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AL354798.1-201ENST00000622505 329 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 MTND4P26-201ENST00000415971 1359 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 OR6K3-202ENST00000368146 996 ntBASIC1.21□□□□□ -2.21
SYNE1Q8NF91 AC073335.1-201ENST00000427776 363 ntBASIC1.21□□□□□ -2.21
SYNE1Q8NF91 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC1.21□□□□□ -2.21
SYNE1Q8NF91 RPL7P9-201ENST00000468715 747 ntBASIC1.21□□□□□ -2.21
SYNE1Q8NF91 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC1.21□□□□□ -2.21
SYNE1Q8NF91 AC022882.1-201ENST00000532142 501 ntBASIC1.21□□□□□ -2.21
SYNE1Q8NF91 YPEL5P3-201ENST00000547227 352 ntBASIC1.21□□□□□ -2.21
SYNE1Q8NF91 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC1.21□□□□□ -2.21
SYNE1Q8NF91 AP002360.3-201ENST00000607673 710 ntBASIC1.21□□□□□ -2.21
SYNE1Q8NF91 AC074140.1-201ENST00000621617 208 ntBASIC1.21□□□□□ -2.21
SYNE1Q8NF91 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC1.21□□□□□ -2.21
SYNE1Q8NF91 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC1.21□□□□□ -2.22
SYNE1Q8NF91 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC1.21□□□□□ -2.22
SYNE1Q8NF91 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
SYNE1Q8NF91 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SYNE1Q8NF91 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC1.21□□□□□ -2.22
SYNE1Q8NF91 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC1.21□□□□□ -2.22
SYNE1Q8NF91 AP001486.1-201ENST00000463339 476 ntBASIC1.21□□□□□ -2.22
SYNE1Q8NF91 PPIAP15-201ENST00000479662 484 ntBASIC1.21□□□□□ -2.22
SYNE1Q8NF91 PTS-202ENST00000524931 696 ntTSL 3 BASIC1.21□□□□□ -2.22
SYNE1Q8NF91 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC1.21□□□□□ -2.22
SYNE1Q8NF91 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
SYNE1Q8NF91 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
SYNE1Q8NF91 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.21□□□□□ -2.22
SYNE1Q8NF91 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SYNE1Q8NF91 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SYNE1Q8NF91 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
SYNE1Q8NF91 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SYNE1Q8NF91 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
SYNE1Q8NF91 RNU6ATAC-201ENST00000408749 126 ntBASIC1.21□□□□□ -2.22
SYNE1Q8NF91 AC068533.1-201ENST00000418542 415 ntBASIC1.21□□□□□ -2.22
SYNE1Q8NF91 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC1.21□□□□□ -2.22
SYNE1Q8NF91 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.21□□□□□ -2.22
SYNE1Q8NF91 RPS29P7-201ENST00000439662 171 ntBASIC1.21□□□□□ -2.22
SYNE1Q8NF91 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC1.21□□□□□ -2.22
SYNE1Q8NF91 AL592156.1-201ENST00000508758 304 ntBASIC1.21□□□□□ -2.22
SYNE1Q8NF91 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms