Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 FRG2DP-202ENST00000566967 323 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AC011477.5-201ENST00000586571 259 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 POLR3GP2-201ENST00000588366 668 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AC008782.1-201ENST00000603386 430 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 DPPA3P3-201ENST00000603842 430 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AL022099.1-201ENST00000604551 712 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AC103710.2-201ENST00000609912 942 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AL445647.2-201ENST00000615170 130 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 uc_338.11-201ENST00000619132 160 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 FKBP1AP4-201ENST00000631775 336 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AL138713.1-201ENST00000624026 2130 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
DEPDC4Q8N2C3 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
DEPDC4Q8N2C3 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.46□□□□□ -1.37
DEPDC4Q8N2C3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
DEPDC4Q8N2C3 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
DEPDC4Q8N2C3 ELL2P4-201ENST00000446870 1376 ntBASIC6.46□□□□□ -1.37
DEPDC4Q8N2C3 LARP1BP1-201ENST00000506036 1359 ntBASIC6.46□□□□□ -1.37
DEPDC4Q8N2C3 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
DEPDC4Q8N2C3 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
DEPDC4Q8N2C3 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
DEPDC4Q8N2C3 NXPH1-205ENST00000602349 1953 ntBASIC6.46□□□□□ -1.37
DEPDC4Q8N2C3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.46□□□□□ -1.37
DEPDC4Q8N2C3 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
DEPDC4Q8N2C3 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 AC067945.1-201ENST00000342609 618 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 RNU6-1013P-201ENST00000384180 107 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 RNU6-39P-201ENST00000384344 107 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 Y_RNA.530-201ENST00000384587 101 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 RNU2-29P-201ENST00000410423 189 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 RNA5SP345-201ENST00000410646 108 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 RNU4-64P-201ENST00000410795 131 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 RPSAP60-201ENST00000415403 880 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 DDX10P2-201ENST00000417796 2614 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 EZH2P1-201ENST00000431167 291 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 MRPS21P3-201ENST00000436696 262 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 RN7SL688P-201ENST00000471754 275 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 SNX18P24-201ENST00000505249 671 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 OR7E163P-201ENST00000505943 894 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 AC091965.3-201ENST00000506236 208 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 AC004062.1-201ENST00000509926 645 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 PRMT5P1-201ENST00000514351 598 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 RNU6-559P-201ENST00000516151 98 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 MTCYBP13-201ENST00000578634 1093 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 RN7SL835P-201ENST00000579920 262 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 AC067852.5-201ENST00000589299 310 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 AC024085.1-201ENST00000604299 432 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 AP001330.4-201ENST00000604350 154 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 AL078624.2-201ENST00000605063 554 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 AC063962.1-201ENST00000608199 521 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 uc_338.21-201ENST00000622458 147 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 AP004289.2-201ENST00000444413 1457 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 THAP12P4-201ENST00000528321 2266 ntBASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.46□□□□□ -1.38
DEPDC4Q8N2C3 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 PANDAR-201ENST00000629595 1506 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms