Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 AL022578.1-201ENST00000439330 1433 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AC130304.1-201ENST00000622942 2385 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AL022323.4-201ENST00000623980 13120 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 ENSAP3-201ENST00000312710 333 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 RNA5SP183-201ENST00000362452 119 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 RNA5SP30-201ENST00000365552 115 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 RNU6-297P-201ENST00000384636 107 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 Y_RNA.548-201ENST00000384656 105 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AL590004.1-201ENST00000405321 300 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 RPS21P8-201ENST00000413365 247 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 METTL15P3-201ENST00000415522 1221 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AL590806.1-201ENST00000415818 853 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AC092647.1-201ENST00000420654 287 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 ELOCP14-201ENST00000428070 331 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 USP9YP9-201ENST00000429406 715 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 OR52B5P-201ENST00000435337 951 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AC104850.1-201ENST00000435940 476 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AC006335.2-201ENST00000437993 330 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 ELOCP7-201ENST00000439968 331 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 SNRPFP4-201ENST00000456366 242 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 LARP1BP2-201ENST00000486594 519 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 CDH12P2-201ENST00000504393 298 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AL009028.1-201ENST00000604895 802 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AC005084.1-201ENST00000605160 304 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AL121655.1-201ENST00000605811 308 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AL049539.1-201ENST00000611964 459 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AL020991.1-201ENST00000612314 373 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 OR8G7P-201ENST00000616658 848 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AC068870.2-201ENST00000620635 389 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 AC087516.1-201ENST00000561236 2428 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 BX284613.1-201ENST00000452221 1641 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 MTND5P23-201ENST00000430812 1655 ntBASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
TMEFF1Q8IYR6 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TMEFF1Q8IYR6 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.62□□□□□ -1.51
TMEFF1Q8IYR6 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TMEFF1Q8IYR6 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.62□□□□□ -1.51
TMEFF1Q8IYR6 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TMEFF1Q8IYR6 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TMEFF1Q8IYR6 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TMEFF1Q8IYR6 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
TMEFF1Q8IYR6 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TMEFF1Q8IYR6 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
TMEFF1Q8IYR6 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.62□□□□□ -1.51
TMEFF1Q8IYR6 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TMEFF1Q8IYR6 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TMEFF1Q8IYR6 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
TMEFF1Q8IYR6 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TMEFF1Q8IYR6 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.62□□□□□ -1.51
TMEFF1Q8IYR6 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TMEFF1Q8IYR6 RNU4-73P-201ENST00000363164 141 ntBASIC5.62□□□□□ -1.51
TMEFF1Q8IYR6 U8.4-201ENST00000363626 134 ntBASIC5.62□□□□□ -1.51
TMEFF1Q8IYR6 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TMEFF1Q8IYR6 MIR525-201ENST00000384978 85 ntBASIC5.62□□□□□ -1.51
TMEFF1Q8IYR6 MIR765-201ENST00000390226 114 ntBASIC5.62□□□□□ -1.51
TMEFF1Q8IYR6 SNORA40.3-201ENST00000390964 122 ntBASIC5.62□□□□□ -1.51
TMEFF1Q8IYR6 AP000357.1-201ENST00000409926 1165 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms