Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 MTND3P23-201ENST00000431980 347 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 AC008072.1-201ENST00000434254 824 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 RPS29P10-201ENST00000439197 166 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 AC093155.1-201ENST00000440164 826 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 SNRPGP9-201ENST00000456025 225 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VRK3Q8IV63 RNA5SP269-201ENST00000459032 137 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 RN7SL172P-201ENST00000460535 303 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 RPL31P58-201ENST00000469001 379 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 ARL2BPP4-201ENST00000506854 471 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 HIGD1AP14-201ENST00000507617 282 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 KRT19P6-201ENST00000510983 209 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 EIF3KP3-201ENST00000514461 639 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 RN7SKP244-201ENST00000516513 307 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 FTH1P11-201ENST00000517577 551 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 BGLT3-201ENST00000564523 994 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 AC022884.2-201ENST00000578535 580 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VRK3Q8IV63 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 AC103881.1-201ENST00000603476 538 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VRK3Q8IV63 AC099676.1-201ENST00000608886 657 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 AL159169.2-201ENST00000610061 1269 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
VRK3Q8IV63 AC118658.2-201ENST00000618697 459 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 AL356321.1-201ENST00000621360 228 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 AC015726.3-201ENST00000624501 418 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.09□□□□□ -1.6
VRK3Q8IV63 AC138393.1-206ENST00000540997 1886 ntBASIC5.09□□□□□ -1.6
VRK3Q8IV63 GVINP1-202ENST00000531871 7271 ntBASIC5.09□□□□□ -1.6
VRK3Q8IV63 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.09□□□□□ -1.6
VRK3Q8IV63 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.09□□□□□ -1.6
VRK3Q8IV63 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
VRK3Q8IV63 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VRK3Q8IV63 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VRK3Q8IV63 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VRK3Q8IV63 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VRK3Q8IV63 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VRK3Q8IV63 Y_RNA.11-201ENST00000362375 109 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 RNU6-707P-201ENST00000364647 95 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 RNU6-114P-201ENST00000384704 105 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 MIR600-201ENST00000385007 98 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 NPM1P38-201ENST00000403835 865 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 MIR1182-201ENST00000408363 97 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VRK3Q8IV63 AL121878.1-201ENST00000418638 859 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 USP9YP18-201ENST00000425912 695 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 AC091862.1-201ENST00000438016 1100 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 DNAJC19P4-201ENST00000440115 345 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 AC092170.1-201ENST00000440211 356 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 AC002542.1-201ENST00000440683 193 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 TCEA1P3-201ENST00000443005 880 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 EEF1E1P1-201ENST00000446998 430 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 AP000542.1-201ENST00000448473 371 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 AL035407.2-201ENST00000454090 378 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 RPL5P13-201ENST00000462840 709 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 AC079841.1-201ENST00000481228 950 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 AC074344.1-201ENST00000512823 224 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 AC108120.2-201ENST00000512973 294 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 RNA5SP92-201ENST00000516437 110 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 AC024940.3-201ENST00000538551 316 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 AL121579.1-201ENST00000555129 305 ntBASIC5.08□□□□□ -1.6
VRK3Q8IV63 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.08□□□□□ -1.6
VRK3Q8IV63 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms