Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 RNU6-1318P-201ENST00000365389 103 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 RNU6-744P-201ENST00000365557 107 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 MRPS6P2-201ENST00000381143 370 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 RNU6-1316P-201ENST00000384242 108 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 CYCSP17-201ENST00000407870 315 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 SETP9-201ENST00000423837 832 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 AC236972.2-201ENST00000434979 310 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 GAPDHP33-201ENST00000443168 1013 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 HMGB1P4-201ENST00000455362 567 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 RPS15AP36-201ENST00000492022 382 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 RN7SL284P-201ENST00000498823 275 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 AC018645.1-201ENST00000505003 109 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 RN7SKP116-201ENST00000516902 319 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 RN7SKP35-201ENST00000517210 151 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 RNU6-794P-201ENST00000517261 64 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 AC107953.1-201ENST00000522216 297 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 AC008507.3-201ENST00000585753 472 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 AC008737.2-201ENST00000599446 118 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 AC004853.1-201ENST00000604902 698 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 RPSAP75-201ENST00000605848 301 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 MIR6826-201ENST00000617808 98 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 TEX41-265ENST00000627785 704 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 AC134503.1-201ENST00000633048 54 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 TRIM51GP-201ENST00000534741 1350 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 MSL3P1-202ENST00000440028 1468 ntBASIC6.91□□□□□ -1.3
RNF135Q8IUD6 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 AC010168.2-201ENST00000562691 5428 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 MAPK10-323ENST00000641493 3207 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 NACAP2-201ENST00000318548 624 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 RNU6-574P-201ENST00000384265 107 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 Y_RNA.474-201ENST00000384341 102 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 RPL32P23-201ENST00000397237 405 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 MIR548P-201ENST00000408336 84 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 RNU2-9P-201ENST00000410194 145 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 RNU2-22P-201ENST00000411266 212 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 AC078974.1-201ENST00000411597 223 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 RPL35AP24-201ENST00000413846 330 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 RPS7P15-201ENST00000415804 584 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 AC009161.1-201ENST00000417306 376 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 OSTCP4-201ENST00000424397 449 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 RPL36AP15-201ENST00000444514 266 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 HIGD1AP16-201ENST00000450986 258 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 Y_RNA.632-201ENST00000459189 102 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 GM2AP2-201ENST00000491764 562 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 AC108693.1-201ENST00000496068 432 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RNF135Q8IUD6 AC008638.1-201ENST00000506035 866 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 CCDC34P1-201ENST00000507441 517 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 RNU6-123P-201ENST00000516163 102 ntBASIC6.9□□□□□ -1.3
RNF135Q8IUD6 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms