Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 MIR3146-201ENST00000580367 79 ntBASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 MIR4503-201ENST00000582187 83 ntBASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 CYP2C61P-201ENST00000604072 290 ntBASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 RPSAP73-201ENST00000614820 330 ntBASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 WAC-209ENST00000428935 1320 ntTSL 2 BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 CASC19-205ENST00000641013 1411 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 AC116158.1-201ENST00000560231 2129 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 AC008555.1-201ENST00000561778 2757 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 RNU6-28P-201ENST00000362378 107 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 Y_RNA.31-201ENST00000362574 102 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 RNA5SP333-201ENST00000363466 118 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 Y_RNA.197-201ENST00000364004 102 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 RNA5SP334-201ENST00000364825 118 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 Y_RNA.395-201ENST00000383945 109 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 AC091390.1-201ENST00000433904 331 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 AL591212.2-201ENST00000433923 257 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 RN7SL705P-201ENST00000481678 294 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 AC004453.1-201ENST00000487895 408 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 RPL23AP72-201ENST00000492447 435 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 HSPD1P15-201ENST00000505573 1122 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 CCDC34P1-201ENST00000507441 517 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 AC004062.1-201ENST00000509926 645 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 SUMO2P20-201ENST00000520803 283 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 OR5D15P-201ENST00000531671 942 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 SNRPGP18-201ENST00000553000 214 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 MIR3149-201ENST00000584629 83 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 AL353997.4-201ENST00000586196 166 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 AC087588.2-201ENST00000617667 426 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 AC130304.1-201ENST00000622942 2385 ntBASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PRPF38BQ5VTL8 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PRPF38BQ5VTL8 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC7.17□□□□□ -1.26
PRPF38BQ5VTL8 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
PRPF38BQ5VTL8 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
PRPF38BQ5VTL8 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
PRPF38BQ5VTL8 VPS35P1-201ENST00000563400 1518 ntBASIC7.17□□□□□ -1.26
PRPF38BQ5VTL8 AP001350.1-201ENST00000601906 1524 ntBASIC7.17□□□□□ -1.26
PRPF38BQ5VTL8 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms