Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC144BQ3MJ40 TAS2R6P-201ENST00000605022 826 ntBASIC6.18□□□□□ -1.42
CCDC144BQ3MJ40 AC069304.2-201ENST00000605154 435 ntBASIC6.18□□□□□ -1.42
CCDC144BQ3MJ40 AC105129.3-201ENST00000605455 485 ntBASIC6.18□□□□□ -1.42
CCDC144BQ3MJ40 AC124312.4-201ENST00000605533 310 ntBASIC6.18□□□□□ -1.42
CCDC144BQ3MJ40 AL049539.1-201ENST00000611964 459 ntBASIC6.18□□□□□ -1.42
CCDC144BQ3MJ40 AC004223.4-201ENST00000612426 332 ntBASIC6.18□□□□□ -1.42
CCDC144BQ3MJ40 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC144BQ3MJ40 AC114546.3-201ENST00000623582 1734 ntBASIC6.18□□□□□ -1.42
CCDC144BQ3MJ40 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC144BQ3MJ40 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CCDC144BQ3MJ40 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CCDC144BQ3MJ40 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
CCDC144BQ3MJ40 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC144BQ3MJ40 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 CYP1D1P-201ENST00000416662 1433 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AL078621.3-201ENST00000623707 2042 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AC011755.1-201ENST00000623763 2049 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 RNA5SP391-201ENST00000363456 119 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 RNU6-553P-201ENST00000364047 96 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 SNORA4.1-201ENST00000364263 144 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 MIR1284-201ENST00000408337 120 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 MOB4-205ENST00000409916 829 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 RPSAP35-201ENST00000413753 818 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 LINC00993-201ENST00000420453 540 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 VDAC1P6-201ENST00000430062 855 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AC105402.2-201ENST00000438503 358 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AL772161.1-201ENST00000439130 476 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 ARL4AP3-201ENST00000441452 574 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 UBE2D3P4-201ENST00000441973 436 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 MTCO1P48-201ENST00000448024 1096 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 RPL7P1-201ENST00000468161 747 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 RPL7P9-201ENST00000468715 747 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AC109462.1-201ENST00000491087 368 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AC093281.2-201ENST00000510153 597 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 SCARNA16.4-201ENST00000516956 187 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AC090819.1-201ENST00000523800 1111 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 PMS2P3-207ENST00000529061 717 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 MIR7853-201ENST00000584820 132 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AC108738.1-201ENST00000603703 237 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AC005191.1-201ENST00000603950 358 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AP002799.1-201ENST00000623552 423 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AC098679.5-201ENST00000624394 571 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 CYP4F35P-202ENST00000636121 390 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AC074101.1-201ENST00000637861 241 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 LINC01739-205ENST00000641890 573 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AC100757.1-201ENST00000616872 1835 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 HSPA8P18-201ENST00000439846 1928 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 AL450326.2-201ENST00000421913 1962 ntBASIC6.17□□□□□ -1.42
CCDC144BQ3MJ40 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 LINC00561-201ENST00000565815 2738 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 AC006210.2-201ENST00000367074 1545 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 AC092681.1-201ENST00000297369 291 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 SNORD116-1-201ENST00000384335 95 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 RNA5SP241-201ENST00000391326 114 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 AL109941.1-201ENST00000401925 229 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 PPIAP9-201ENST00000403866 498 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 U3.36-201ENST00000408418 213 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 RNU2-28P-201ENST00000410457 189 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 P2RY10P2-201ENST00000416730 913 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 AC093655.2-201ENST00000425735 631 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 AC234779.1-201ENST00000425910 285 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 AC096632.1-201ENST00000427395 310 ntBASIC6.16□□□□□ -1.42
CCDC144BQ3MJ40 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms