Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.82□□□□□ -1.8
LMO4P61968 AC098679.4-201ENST00000624241 654 ntBASIC3.82□□□□□ -1.8
LMO4P61968 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC3.82□□□□□ -1.8
LMO4P61968 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LMO4P61968 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
LMO4P61968 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LMO4P61968 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC3.82□□□□□ -1.8
LMO4P61968 DDX18P4-201ENST00000511690 1966 ntBASIC3.82□□□□□ -1.8
LMO4P61968 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LMO4P61968 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LMO4P61968 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.81□□□□□ -1.8
LMO4P61968 AC008079.2-201ENST00000623543 20396 ntBASIC3.81□□□□□ -1.8
LMO4P61968 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LMO4P61968 AL445487.1-201ENST00000415694 1580 ntBASIC3.81□□□□□ -1.8
LMO4P61968 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.81□□□□□ -1.8
LMO4P61968 AL390862.1-201ENST00000635467 1469 ntBASIC3.81□□□□□ -1.8
LMO4P61968 AC096656.1-201ENST00000623826 1364 ntBASIC3.81□□□□□ -1.8
LMO4P61968 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
LMO4P61968 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
LMO4P61968 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
LMO4P61968 OR5H2-201ENST00000355273 945 ntBASIC3.81□□□□□ -1.8
LMO4P61968 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
LMO4P61968 SNORA62.2-201ENST00000364672 152 ntBASIC3.81□□□□□ -1.8
LMO4P61968 RNA5SP187-201ENST00000384400 119 ntBASIC3.81□□□□□ -1.8
LMO4P61968 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
LMO4P61968 VDAC2P1-201ENST00000399358 958 ntBASIC3.81□□□□□ -1.8
LMO4P61968 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LMO4P61968 AL445183.3-201ENST00000414168 502 ntBASIC3.81□□□□□ -1.8
LMO4P61968 AL158825.1-201ENST00000414735 521 ntBASIC3.81□□□□□ -1.8
LMO4P61968 AL449283.1-202ENST00000418249 604 ntBASIC3.81□□□□□ -1.8
LMO4P61968 MTND2P18-201ENST00000419962 1030 ntBASIC3.81□□□□□ -1.8
LMO4P61968 GAPDHP49-201ENST00000421421 961 ntBASIC3.81□□□□□ -1.8
LMO4P61968 AL356387.2-201ENST00000422272 243 ntBASIC3.81□□□□□ -1.8
LMO4P61968 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LMO4P61968 HIGD1AP4-201ENST00000430194 280 ntBASIC3.81□□□□□ -1.8
LMO4P61968 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.81□□□□□ -1.8
LMO4P61968 ELOCP10-201ENST00000440624 327 ntBASIC3.81□□□□□ -1.8
LMO4P61968 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
LMO4P61968 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC3.81□□□□□ -1.8
LMO4P61968 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.81□□□□□ -1.8
LMO4P61968 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.81□□□□□ -1.8
LMO4P61968 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.81□□□□□ -1.8
LMO4P61968 RNU6-1218P-201ENST00000458990 108 ntBASIC3.81□□□□□ -1.8
LMO4P61968 RPL23AP12-201ENST00000467573 473 ntBASIC3.81□□□□□ -1.8
LMO4P61968 AC011276.1-201ENST00000469688 323 ntBASIC3.81□□□□□ -1.8
LMO4P61968 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.81□□□□□ -1.8
LMO4P61968 AC090686.1-201ENST00000481577 749 ntBASIC3.81□□□□□ -1.8
LMO4P61968 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC3.81□□□□□ -1.8
LMO4P61968 RN7SKP122-201ENST00000515923 296 ntBASIC3.81□□□□□ -1.8
LMO4P61968 SNORA70.11-201ENST00000515987 138 ntBASIC3.81□□□□□ -1.8
LMO4P61968 SNORA70.13-201ENST00000516116 138 ntBASIC3.81□□□□□ -1.8
LMO4P61968 RNA5SP249-201ENST00000516127 99 ntBASIC3.81□□□□□ -1.8
LMO4P61968 RNA5SP230-201ENST00000517039 122 ntBASIC3.81□□□□□ -1.8
LMO4P61968 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.81□□□□□ -1.8
LMO4P61968 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC3.81□□□□□ -1.8
LMO4P61968 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
LMO4P61968 NELL2-211ENST00000548826 559 ntTSL 2 BASIC3.81□□□□□ -1.8
LMO4P61968 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.81□□□□□ -1.8
LMO4P61968 AC025918.2-201ENST00000558683 763 ntBASIC3.81□□□□□ -1.8
LMO4P61968 AC104229.1-201ENST00000561364 255 ntBASIC3.81□□□□□ -1.8
LMO4P61968 AC009094.1-201ENST00000564443 426 ntBASIC3.81□□□□□ -1.8
LMO4P61968 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.81□□□□□ -1.8
LMO4P61968 MIR4660-201ENST00000583549 74 ntBASIC3.81□□□□□ -1.8
LMO4P61968 CCDC58P3-201ENST00000590792 430 ntBASIC3.81□□□□□ -1.8
LMO4P61968 AC010620.1-201ENST00000601088 1102 ntBASIC3.81□□□□□ -1.8
LMO4P61968 AL353778.1-201ENST00000603149 408 ntBASIC3.81□□□□□ -1.8
LMO4P61968 ELOCP34-201ENST00000604436 327 ntBASIC3.81□□□□□ -1.8
LMO4P61968 AC073387.2-201ENST00000604797 784 ntBASIC3.81□□□□□ -1.8
LMO4P61968 AC025588.2-201ENST00000604851 466 ntBASIC3.81□□□□□ -1.8
LMO4P61968 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.81□□□□□ -1.8
LMO4P61968 AC024023.1-201ENST00000624530 922 ntBASIC3.81□□□□□ -1.8
LMO4P61968 AC016717.3-201ENST00000624730 554 ntBASIC3.81□□□□□ -1.8
LMO4P61968 MIR6830-201ENST00000636015 70 ntBASIC3.81□□□□□ -1.8
LMO4P61968 MIR3974-201ENST00000637126 96 ntBASIC3.81□□□□□ -1.8
LMO4P61968 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
LMO4P61968 AC093311.1-201ENST00000506586 2021 ntBASIC3.81□□□□□ -1.8
LMO4P61968 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LMO4P61968 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LMO4P61968 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
LMO4P61968 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC3.81□□□□□ -1.8
LMO4P61968 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LMO4P61968 AC100778.3-201ENST00000580060 1750 ntBASIC3.81□□□□□ -1.8
LMO4P61968 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
LMO4P61968 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
LMO4P61968 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LMO4P61968 AC025031.4-201ENST00000621248 3271 ntBASIC3.8□□□□□ -1.8
LMO4P61968 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
LMO4P61968 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC3.8□□□□□ -1.8
LMO4P61968 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
LMO4P61968 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC3.8□□□□□ -1.8
LMO4P61968 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LMO4P61968 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LMO4P61968 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LMO4P61968 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LMO4P61968 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.8□□□□□ -1.8
LMO4P61968 AC008432.1-201ENST00000615912 1320 ntBASIC3.8□□□□□ -1.8
LMO4P61968 MFSD8-213ENST00000641134 1327 ntBASIC3.8□□□□□ -1.8
LMO4P61968 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
LMO4P61968 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LMO4P61968 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms