Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HTTP42858 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC4□□□□□ -1.77
HTTP42858 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
HTTP42858 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4□□□□□ -1.77
HTTP42858 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4□□□□□ -1.77
HTTP42858 AL162274.2-201ENST00000614406 332 ntBASIC4□□□□□ -1.77
HTTP42858 AL732618.1-201ENST00000623251 301 ntBASIC4□□□□□ -1.77
HTTP42858 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HTTP42858 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4□□□□□ -1.77
HTTP42858 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HTTP42858 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC4□□□□□ -1.77
HTTP42858 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC4□□□□□ -1.77
HTTP42858 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HTTP42858 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HTTP42858 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4□□□□□ -1.77
HTTP42858 RPL7AP73-201ENST00000413490 353 ntBASIC4□□□□□ -1.77
HTTP42858 AC010740.1-201ENST00000417035 684 ntBASIC4□□□□□ -1.77
HTTP42858 BX890604.2-201ENST00000427883 474 ntBASIC4□□□□□ -1.77
HTTP42858 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4□□□□□ -1.77
HTTP42858 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4□□□□□ -1.77
HTTP42858 AC097262.1-201ENST00000452559 548 ntBASIC4□□□□□ -1.77
HTTP42858 U3.44-201ENST00000458938 192 ntBASIC4□□□□□ -1.77
HTTP42858 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4□□□□□ -1.77
HTTP42858 AC025554.1-201ENST00000505641 188 ntBASIC4□□□□□ -1.77
HTTP42858 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4□□□□□ -1.77
HTTP42858 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4□□□□□ -1.77
HTTP42858 AC107993.1-201ENST00000591343 684 ntBASIC4□□□□□ -1.77
HTTP42858 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
HTTP42858 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4□□□□□ -1.77
HTTP42858 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
HTTP42858 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4□□□□□ -1.77
HTTP42858 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
HTTP42858 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
HTTP42858 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HTTP42858 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC3.99□□□□□ -1.77
HTTP42858 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HTTP42858 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
HTTP42858 RPL23AP89-201ENST00000439324 255 ntBASIC3.99□□□□□ -1.77
HTTP42858 DNAJC19P8-201ENST00000452887 259 ntBASIC3.99□□□□□ -1.77
HTTP42858 AC108941.1-201ENST00000502853 530 ntBASIC3.99□□□□□ -1.77
HTTP42858 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HTTP42858 AC067852.3-201ENST00000589177 561 ntBASIC3.99□□□□□ -1.77
HTTP42858 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.99□□□□□ -1.77
HTTP42858 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HTTP42858 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HTTP42858 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.99□□□□□ -1.77
HTTP42858 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.99□□□□□ -1.77
HTTP42858 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.99□□□□□ -1.77
HTTP42858 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.99□□□□□ -1.77
HTTP42858 RNU6-237P-201ENST00000515985 71 ntBASIC3.99□□□□□ -1.77
HTTP42858 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HTTP42858 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.99□□□□□ -1.77
HTTP42858 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HTTP42858 AL365361.1-201ENST00000566942 3481 ntBASIC3.99□□□□□ -1.77
HTTP42858 AL356274.2-201ENST00000624379 3752 ntBASIC3.99□□□□□ -1.77
HTTP42858 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
HTTP42858 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
HTTP42858 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.99□□□□□ -1.77
HTTP42858 RNA5SP424-201ENST00000390988 115 ntBASIC3.99□□□□□ -1.77
HTTP42858 RN7SKP53-201ENST00000411337 315 ntBASIC3.99□□□□□ -1.77
HTTP42858 AC073335.1-201ENST00000427776 363 ntBASIC3.99□□□□□ -1.77
HTTP42858 GTF3AP5-201ENST00000442645 697 ntBASIC3.99□□□□□ -1.77
HTTP42858 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HTTP42858 LARP7P3-201ENST00000579888 337 ntBASIC3.99□□□□□ -1.77
HTTP42858 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.99□□□□□ -1.77
HTTP42858 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC3.99□□□□□ -1.77
HTTP42858 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HTTP42858 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
HTTP42858 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.98□□□□□ -1.77
HTTP42858 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HTTP42858 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HTTP42858 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HTTP42858 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HTTP42858 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HTTP42858 OR56A5-201ENST00000340110 738 ntBASIC3.98□□□□□ -1.77
HTTP42858 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.98□□□□□ -1.77
HTTP42858 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.98□□□□□ -1.77
HTTP42858 RNU1-41P-201ENST00000516161 162 ntBASIC3.98□□□□□ -1.77
HTTP42858 RNU1-48P-201ENST00000516400 162 ntBASIC3.98□□□□□ -1.77
HTTP42858 AC104984.5-201ENST00000586878 94 ntBASIC3.98□□□□□ -1.77
HTTP42858 AC103881.1-201ENST00000603476 538 ntBASIC3.98□□□□□ -1.77
HTTP42858 RNVU1-4-201ENST00000612985 164 ntBASIC3.98□□□□□ -1.77
HTTP42858 BMS1P21-201ENST00000634565 365 ntBASIC3.98□□□□□ -1.77
HTTP42858 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HTTP42858 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
HTTP42858 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.98□□□□□ -1.77
HTTP42858 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HTTP42858 U3.19-201ENST00000390893 196 ntBASIC3.98□□□□□ -1.77
HTTP42858 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.98□□□□□ -1.77
HTTP42858 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.98□□□□□ -1.77
HTTP42858 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.98□□□□□ -1.77
HTTP42858 SRP72P2-201ENST00000344851 1979 ntBASIC3.98□□□□□ -1.77
HTTP42858 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HTTP42858 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HTTP42858 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HTTP42858 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
HTTP42858 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.97□□□□□ -1.77
HTTP42858 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.97□□□□□ -1.77
HTTP42858 AC004656.1-201ENST00000568479 4951 ntBASIC3.97□□□□□ -1.77
HTTP42858 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms