Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CIITAP33076 AL137100.1-201ENST00000556703 1620 ntBASIC5.14□□□□□ -1.59
CIITAP33076 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.14□□□□□ -1.59
CIITAP33076 AC017007.4-201ENST00000503353 1352 ntBASIC5.14□□□□□ -1.59
CIITAP33076 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CIITAP33076 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CIITAP33076 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CIITAP33076 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CIITAP33076 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.13□□□□□ -1.59
CIITAP33076 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CIITAP33076 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CIITAP33076 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CIITAP33076 UBBP2-201ENST00000376781 231 ntBASIC5.13□□□□□ -1.59
CIITAP33076 RNU6-185P-201ENST00000384421 107 ntBASIC5.13□□□□□ -1.59
CIITAP33076 TAS2R15P-201ENST00000390674 928 ntBASIC5.13□□□□□ -1.59
CIITAP33076 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.13□□□□□ -1.59
CIITAP33076 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.13□□□□□ -1.59
CIITAP33076 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.13□□□□□ -1.59
CIITAP33076 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.13□□□□□ -1.59
CIITAP33076 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.13□□□□□ -1.59
CIITAP33076 RPL21P91-201ENST00000429231 479 ntBASIC5.13□□□□□ -1.59
CIITAP33076 AC068287.1-201ENST00000430283 295 ntBASIC5.13□□□□□ -1.59
CIITAP33076 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.13□□□□□ -1.59
CIITAP33076 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.13□□□□□ -1.59
CIITAP33076 AC092013.1-201ENST00000438795 332 ntBASIC5.13□□□□□ -1.59
CIITAP33076 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.13□□□□□ -1.59
CIITAP33076 RPL34P26-201ENST00000445636 354 ntBASIC5.13□□□□□ -1.59
CIITAP33076 AC004022.1-201ENST00000447766 1066 ntBASIC5.13□□□□□ -1.59
CIITAP33076 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.13□□□□□ -1.59
CIITAP33076 AL591473.1-201ENST00000464297 313 ntBASIC5.13□□□□□ -1.59
CIITAP33076 AC112206.1-201ENST00000468416 477 ntBASIC5.13□□□□□ -1.59
CIITAP33076 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.13□□□□□ -1.59
CIITAP33076 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CIITAP33076 RN7SKP141-201ENST00000516167 338 ntBASIC5.13□□□□□ -1.59
CIITAP33076 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.13□□□□□ -1.59
CIITAP33076 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.13□□□□□ -1.59
CIITAP33076 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.13□□□□□ -1.59
CIITAP33076 AP003717.3-201ENST00000544832 1180 ntBASIC5.13□□□□□ -1.59
CIITAP33076 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.13□□□□□ -1.59
CIITAP33076 AC068714.1-201ENST00000559623 800 ntBASIC5.13□□□□□ -1.59
CIITAP33076 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.13□□□□□ -1.59
CIITAP33076 ZNF971P-201ENST00000562068 1249 ntBASIC5.13□□□□□ -1.59
CIITAP33076 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.13□□□□□ -1.59
CIITAP33076 AC245036.5-201ENST00000596330 847 ntBASIC5.13□□□□□ -1.59
CIITAP33076 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.13□□□□□ -1.59
CIITAP33076 AC008751.2-201ENST00000597885 980 ntBASIC5.13□□□□□ -1.59
CIITAP33076 AC005191.1-201ENST00000603950 358 ntBASIC5.13□□□□□ -1.59
CIITAP33076 AC012409.3-201ENST00000611343 981 ntBASIC5.13□□□□□ -1.59
CIITAP33076 MIR6891-201ENST00000618788 93 ntBASIC5.13□□□□□ -1.59
CIITAP33076 AP005019.3-201ENST00000620418 560 ntBASIC5.13□□□□□ -1.59
CIITAP33076 AC015871.5-202ENST00000623252 701 ntBASIC5.13□□□□□ -1.59
CIITAP33076 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.13□□□□□ -1.59
CIITAP33076 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CIITAP33076 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CIITAP33076 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.13□□□□□ -1.59
CIITAP33076 AC090017.1-201ENST00000548612 1779 ntBASIC5.13□□□□□ -1.59
CIITAP33076 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.13□□□□□ -1.59
CIITAP33076 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CIITAP33076 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.13□□□□□ -1.59
CIITAP33076 MTND4P8-201ENST00000514997 1362 ntBASIC5.13□□□□□ -1.59
CIITAP33076 AC096656.1-201ENST00000623826 1364 ntBASIC5.13□□□□□ -1.59
CIITAP33076 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CIITAP33076 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CIITAP33076 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CIITAP33076 AP000756.2-201ENST00000624168 2567 ntBASIC5.12□□□□□ -1.59
CIITAP33076 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CIITAP33076 MAPK10-286ENST00000641208 8747 ntBASIC5.12□□□□□ -1.59
CIITAP33076 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CIITAP33076 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.12□□□□□ -1.59
CIITAP33076 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CIITAP33076 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.12□□□□□ -1.59
CIITAP33076 RPL23AP59-201ENST00000399415 461 ntBASIC5.12□□□□□ -1.59
CIITAP33076 RPS27AP11-201ENST00000402798 447 ntBASIC5.12□□□□□ -1.59
CIITAP33076 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.12□□□□□ -1.59
CIITAP33076 RPL6P29-201ENST00000414863 865 ntBASIC5.12□□□□□ -1.59
CIITAP33076 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.12□□□□□ -1.59
CIITAP33076 USP9YP24-201ENST00000434374 697 ntBASIC5.12□□□□□ -1.59
CIITAP33076 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.12□□□□□ -1.59
CIITAP33076 MTCYBP31-201ENST00000438855 1122 ntBASIC5.12□□□□□ -1.59
CIITAP33076 USP9YP17-201ENST00000444617 696 ntBASIC5.12□□□□□ -1.59
CIITAP33076 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.12□□□□□ -1.59
CIITAP33076 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.12□□□□□ -1.59
CIITAP33076 RPS20P4-201ENST00000461659 355 ntBASIC5.12□□□□□ -1.59
CIITAP33076 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.12□□□□□ -1.59
CIITAP33076 AC025674.1-201ENST00000507074 324 ntBASIC5.12□□□□□ -1.59
CIITAP33076 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
CIITAP33076 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CIITAP33076 SNORA31.13-201ENST00000516624 135 ntBASIC5.12□□□□□ -1.59
CIITAP33076 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.12□□□□□ -1.59
CIITAP33076 OR8I1P-201ENST00000529291 931 ntBASIC5.12□□□□□ -1.59
CIITAP33076 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.12□□□□□ -1.59
CIITAP33076 OR4U1P-201ENST00000554958 912 ntBASIC5.12□□□□□ -1.59
CIITAP33076 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.12□□□□□ -1.59
CIITAP33076 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.12□□□□□ -1.59
CIITAP33076 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.12□□□□□ -1.59
CIITAP33076 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.12□□□□□ -1.59
CIITAP33076 MIR4789-201ENST00000577469 82 ntBASIC5.12□□□□□ -1.59
CIITAP33076 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.12□□□□□ -1.59
CIITAP33076 HMGB2P1-201ENST00000591146 634 ntBASIC5.12□□□□□ -1.59
CIITAP33076 VN1R84P-201ENST00000593697 235 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms