Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.01□□□□□ -1.45
CLIP1P30622 AL354760.1-201ENST00000608357 643 ntBASIC6.01□□□□□ -1.45
CLIP1P30622 AC016957.2-201ENST00000616998 848 ntBASIC6.01□□□□□ -1.45
CLIP1P30622 AC091953.5-201ENST00000622919 233 ntBASIC6.01□□□□□ -1.45
CLIP1P30622 AC015813.6-201ENST00000624409 5808 ntBASIC6.01□□□□□ -1.45
CLIP1P30622 AC027290.2-201ENST00000623210 18662 ntBASIC6.01□□□□□ -1.45
CLIP1P30622 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC6.01□□□□□ -1.45
CLIP1P30622 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CLIP1P30622 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP1P30622 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP1P30622 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP1P30622 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLIP1P30622 RNU2-65P-201ENST00000410162 185 ntBASIC6□□□□□ -1.45
CLIP1P30622 AC087650.1-201ENST00000431445 468 ntBASIC6□□□□□ -1.45
CLIP1P30622 AC096638.2-201ENST00000434965 711 ntBASIC6□□□□□ -1.45
CLIP1P30622 SETD6P1-201ENST00000444575 317 ntBASIC6□□□□□ -1.45
CLIP1P30622 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
CLIP1P30622 CDH12P2-201ENST00000504393 298 ntBASIC6□□□□□ -1.45
CLIP1P30622 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLIP1P30622 HMGN1P11-201ENST00000508668 303 ntBASIC6□□□□□ -1.45
CLIP1P30622 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6□□□□□ -1.45
CLIP1P30622 IGHV3-63-201ENST00000518422 341 ntBASIC6□□□□□ -1.45
CLIP1P30622 OR7E13P-201ENST00000526052 910 ntBASIC6□□□□□ -1.45
CLIP1P30622 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC6□□□□□ -1.45
CLIP1P30622 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC6□□□□□ -1.45
CLIP1P30622 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC6□□□□□ -1.45
CLIP1P30622 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
CLIP1P30622 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLIP1P30622 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLIP1P30622 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
CLIP1P30622 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CLIP1P30622 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6□□□□□ -1.45
CLIP1P30622 RNU6-525P-201ENST00000363685 104 ntBASIC5.99□□□□□ -1.45
CLIP1P30622 RNA5SP72-201ENST00000364442 117 ntBASIC5.99□□□□□ -1.45
CLIP1P30622 AC245052.5-201ENST00000416320 649 ntBASIC5.99□□□□□ -1.45
CLIP1P30622 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.99□□□□□ -1.45
CLIP1P30622 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.99□□□□□ -1.45
CLIP1P30622 OR8I1P-201ENST00000529291 931 ntBASIC5.99□□□□□ -1.45
CLIP1P30622 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.99□□□□□ -1.45
CLIP1P30622 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.99□□□□□ -1.45
CLIP1P30622 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.99□□□□□ -1.45
CLIP1P30622 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.99□□□□□ -1.45
CLIP1P30622 AL133247.2-201ENST00000603236 482 ntBASIC5.99□□□□□ -1.45
CLIP1P30622 AC008638.3-201ENST00000603341 463 ntBASIC5.99□□□□□ -1.45
CLIP1P30622 AL159169.3-201ENST00000608871 561 ntBASIC5.99□□□□□ -1.45
CLIP1P30622 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.99□□□□□ -1.45
CLIP1P30622 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLIP1P30622 AC083843.3-201ENST00000623679 2186 ntBASIC5.99□□□□□ -1.45
CLIP1P30622 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLIP1P30622 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLIP1P30622 SNORD74.4-201ENST00000364129 80 ntBASIC5.99□□□□□ -1.45
CLIP1P30622 MIR34B-201ENST00000385076 84 ntBASIC5.99□□□□□ -1.45
CLIP1P30622 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.99□□□□□ -1.45
CLIP1P30622 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.99□□□□□ -1.45
CLIP1P30622 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.99□□□□□ -1.45
CLIP1P30622 PRDX3P3-201ENST00000447765 522 ntBASIC5.99□□□□□ -1.45
CLIP1P30622 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.99□□□□□ -1.45
CLIP1P30622 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.99□□□□□ -1.45
CLIP1P30622 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLIP1P30622 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.99□□□□□ -1.45
CLIP1P30622 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLIP1P30622 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.99□□□□□ -1.45
CLIP1P30622 RN7SKP18-201ENST00000516005 275 ntBASIC5.99□□□□□ -1.45
CLIP1P30622 AC119674.1-207ENST00000641355 633 ntBASIC5.99□□□□□ -1.45
CLIP1P30622 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLIP1P30622 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLIP1P30622 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLIP1P30622 BTBD10P1-201ENST00000549824 1352 ntBASIC5.98□□□□□ -1.45
CLIP1P30622 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.98□□□□□ -1.45
CLIP1P30622 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLIP1P30622 AP001284.1-201ENST00000528393 2118 ntBASIC5.98□□□□□ -1.45
CLIP1P30622 LINC01109-201ENST00000603837 3081 ntBASIC5.98□□□□□ -1.45
CLIP1P30622 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLIP1P30622 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLIP1P30622 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.98□□□□□ -1.45
CLIP1P30622 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.98□□□□□ -1.45
CLIP1P30622 SULT1C2P2-201ENST00000562517 294 ntBASIC5.98□□□□□ -1.45
CLIP1P30622 AC079298.2-201ENST00000623885 459 ntBASIC5.98□□□□□ -1.45
CLIP1P30622 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLIP1P30622 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CLIP1P30622 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CLIP1P30622 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP1P30622 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CLIP1P30622 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP1P30622 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP1P30622 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP1P30622 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP1P30622 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
CLIP1P30622 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP1P30622 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP1P30622 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CLIP1P30622 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.97□□□□□ -1.45
CLIP1P30622 REREP1Y-201ENST00000422655 198 ntBASIC5.97□□□□□ -1.45
CLIP1P30622 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.97□□□□□ -1.45
CLIP1P30622 HSPD1P21-201ENST00000436541 245 ntBASIC5.97□□□□□ -1.45
CLIP1P30622 REREP2Y-201ENST00000439103 200 ntBASIC5.97□□□□□ -1.45
CLIP1P30622 PLGLA-201ENST00000465668 449 ntBASIC5.97□□□□□ -1.45
CLIP1P30622 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.97□□□□□ -1.45
CLIP1P30622 AC005412.1-201ENST00000580812 1049 ntBASIC5.97□□□□□ -1.45
CLIP1P30622 MRPS35P3-201ENST00000603189 709 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms