Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATF4P18848 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.51□□□□□ -1.53
ATF4P18848 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
ATF4P18848 EEF1A1P22-201ENST00000559385 1380 ntBASIC5.51□□□□□ -1.53
ATF4P18848 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATF4P18848 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATF4P18848 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATF4P18848 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC5.51□□□□□ -1.53
ATF4P18848 AC027287.1-201ENST00000553115 1453 ntBASIC5.51□□□□□ -1.53
ATF4P18848 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATF4P18848 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.5□□□□□ -1.53
ATF4P18848 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ATF4P18848 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ATF4P18848 LINC01963-201ENST00000562038 3148 ntBASIC5.5□□□□□ -1.53
ATF4P18848 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
ATF4P18848 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.5□□□□□ -1.53
ATF4P18848 AC009951.1-201ENST00000623674 2614 ntBASIC5.5□□□□□ -1.53
ATF4P18848 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ATF4P18848 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ATF4P18848 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.5□□□□□ -1.53
ATF4P18848 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ATF4P18848 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.5□□□□□ -1.53
ATF4P18848 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATF4P18848 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.5□□□□□ -1.53
ATF4P18848 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
ATF4P18848 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATF4P18848 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.5□□□□□ -1.53
ATF4P18848 RNU6-1017P-201ENST00000363613 106 ntBASIC5.5□□□□□ -1.53
ATF4P18848 RN7SKP224-201ENST00000364140 325 ntBASIC5.5□□□□□ -1.53
ATF4P18848 RNU5E-4P-201ENST00000364931 120 ntBASIC5.5□□□□□ -1.53
ATF4P18848 RNU6-282P-201ENST00000365357 103 ntBASIC5.5□□□□□ -1.53
ATF4P18848 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
ATF4P18848 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
ATF4P18848 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.5□□□□□ -1.53
ATF4P18848 Y_RNA.493-201ENST00000384422 102 ntBASIC5.5□□□□□ -1.53
ATF4P18848 RNU6-456P-201ENST00000384493 107 ntBASIC5.5□□□□□ -1.53
ATF4P18848 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ATF4P18848 EIF4A1P3-201ENST00000411521 244 ntBASIC5.5□□□□□ -1.53
ATF4P18848 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.5□□□□□ -1.53
ATF4P18848 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC5.5□□□□□ -1.53
ATF4P18848 FTOP1-201ENST00000419363 861 ntBASIC5.5□□□□□ -1.53
ATF4P18848 UQCRHP1-204ENST00000424609 274 ntBASIC5.5□□□□□ -1.53
ATF4P18848 CHCHD3P1-201ENST00000425516 676 ntBASIC5.5□□□□□ -1.53
ATF4P18848 AC092651.1-201ENST00000426110 312 ntBASIC5.5□□□□□ -1.53
ATF4P18848 AL590399.2-201ENST00000427536 309 ntBASIC5.5□□□□□ -1.53
ATF4P18848 PSMD10P2-201ENST00000432890 672 ntBASIC5.5□□□□□ -1.53
ATF4P18848 RPL14P5-201ENST00000436474 730 ntBASIC5.5□□□□□ -1.53
ATF4P18848 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.5□□□□□ -1.53
ATF4P18848 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.5□□□□□ -1.53
ATF4P18848 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.5□□□□□ -1.53
ATF4P18848 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC5.5□□□□□ -1.53
ATF4P18848 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC5.5□□□□□ -1.53
ATF4P18848 RN7SL88P-201ENST00000480166 299 ntBASIC5.5□□□□□ -1.53
ATF4P18848 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ATF4P18848 SNORA58-201ENST00000505219 137 ntBASIC5.5□□□□□ -1.53
ATF4P18848 AC010409.2-201ENST00000505780 478 ntBASIC5.5□□□□□ -1.53
ATF4P18848 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.5□□□□□ -1.53
ATF4P18848 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.5□□□□□ -1.53
ATF4P18848 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.5□□□□□ -1.53
ATF4P18848 Y_RNA.693-201ENST00000516641 110 ntBASIC5.5□□□□□ -1.53
ATF4P18848 RN7SKP11-201ENST00000517018 287 ntBASIC5.5□□□□□ -1.53
ATF4P18848 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.5□□□□□ -1.53
ATF4P18848 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.5□□□□□ -1.53
ATF4P18848 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.5□□□□□ -1.53
ATF4P18848 AP005639.1-201ENST00000526939 192 ntBASIC5.5□□□□□ -1.53
ATF4P18848 OR10G5P-201ENST00000532733 358 ntBASIC5.5□□□□□ -1.53
ATF4P18848 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.5□□□□□ -1.53
ATF4P18848 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.5□□□□□ -1.53
ATF4P18848 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC5.5□□□□□ -1.53
ATF4P18848 AC009852.2-201ENST00000567898 485 ntBASIC5.5□□□□□ -1.53
ATF4P18848 MIR4458-201ENST00000578872 75 ntBASIC5.5□□□□□ -1.53
ATF4P18848 MIR3167-201ENST00000579623 85 ntBASIC5.5□□□□□ -1.53
ATF4P18848 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.5□□□□□ -1.53
ATF4P18848 AC068790.5-201ENST00000602741 355 ntBASIC5.5□□□□□ -1.53
ATF4P18848 AP003117.2-201ENST00000606010 545 ntBASIC5.5□□□□□ -1.53
ATF4P18848 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC5.5□□□□□ -1.53
ATF4P18848 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC5.5□□□□□ -1.53
ATF4P18848 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.5□□□□□ -1.53
ATF4P18848 AC002550.2-201ENST00000621246 394 ntBASIC5.5□□□□□ -1.53
ATF4P18848 AC112204.3-201ENST00000623822 332 ntBASIC5.5□□□□□ -1.53
ATF4P18848 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC5.5□□□□□ -1.53
ATF4P18848 AC099654.14-201ENST00000638599 341 ntBASIC5.5□□□□□ -1.53
ATF4P18848 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
ATF4P18848 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.5□□□□□ -1.53
ATF4P18848 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
ATF4P18848 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.5□□□□□ -1.53
ATF4P18848 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
ATF4P18848 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.5□□□□□ -1.53
ATF4P18848 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
ATF4P18848 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATF4P18848 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
ATF4P18848 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATF4P18848 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATF4P18848 AL031595.2-201ENST00000624215 19071 ntBASIC5.5□□□□□ -1.53
ATF4P18848 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATF4P18848 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
ATF4P18848 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATF4P18848 SAMMSON-203ENST00000641005 2168 ntBASIC5.49□□□□□ -1.53
ATF4P18848 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
ATF4P18848 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms