Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NID1P14543 AC012603.1-201ENST00000606424 528 ntBASIC6.09□□□□□ -1.43
NID1P14543 RNU6-89P-201ENST00000606519 100 ntBASIC6.09□□□□□ -1.43
NID1P14543 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC6.09□□□□□ -1.43
NID1P14543 AC004696.1-201ENST00000614345 607 ntBASIC6.09□□□□□ -1.43
NID1P14543 AC211486.4-201ENST00000621495 113 ntBASIC6.09□□□□□ -1.43
NID1P14543 AL355480.1-201ENST00000629041 99 ntBASIC6.09□□□□□ -1.43
NID1P14543 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.09□□□□□ -1.43
NID1P14543 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.09□□□□□ -1.43
NID1P14543 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.09□□□□□ -1.43
NID1P14543 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NID1P14543 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
NID1P14543 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.09□□□□□ -1.44
NID1P14543 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
NID1P14543 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.09□□□□□ -1.44
NID1P14543 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
NID1P14543 AP004289.2-201ENST00000444413 1457 ntBASIC6.09□□□□□ -1.44
NID1P14543 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
NID1P14543 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.09□□□□□ -1.44
NID1P14543 MTND5P10-201ENST00000603719 1809 ntBASIC6.09□□□□□ -1.44
NID1P14543 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.08□□□□□ -1.44
NID1P14543 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NID1P14543 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NID1P14543 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.08□□□□□ -1.44
NID1P14543 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NID1P14543 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NID1P14543 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NID1P14543 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
NID1P14543 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NID1P14543 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NID1P14543 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.08□□□□□ -1.44
NID1P14543 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
NID1P14543 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
NID1P14543 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NID1P14543 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.08□□□□□ -1.44
NID1P14543 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NID1P14543 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
NID1P14543 RNU1-35P-201ENST00000362782 153 ntBASIC6.08□□□□□ -1.44
NID1P14543 RNY1P12-201ENST00000364251 105 ntBASIC6.08□□□□□ -1.44
NID1P14543 SNORA62.2-201ENST00000364672 152 ntBASIC6.08□□□□□ -1.44
NID1P14543 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NID1P14543 RNU6-730P-201ENST00000383954 104 ntBASIC6.08□□□□□ -1.44
NID1P14543 RNU6-1026P-201ENST00000384465 108 ntBASIC6.08□□□□□ -1.44
NID1P14543 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
NID1P14543 AL033519.1-201ENST00000407266 307 ntBASIC6.08□□□□□ -1.44
NID1P14543 RN7SKP106-201ENST00000410832 272 ntBASIC6.08□□□□□ -1.44
NID1P14543 RN7SKP247-201ENST00000411094 308 ntBASIC6.08□□□□□ -1.44
NID1P14543 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.08□□□□□ -1.44
NID1P14543 RPS6P23-201ENST00000413224 722 ntBASIC6.08□□□□□ -1.44
NID1P14543 RPL36P18-201ENST00000419316 318 ntBASIC6.08□□□□□ -1.44
NID1P14543 CYCSP52-201ENST00000422857 310 ntBASIC6.08□□□□□ -1.44
NID1P14543 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NID1P14543 AC234771.4-201ENST00000441416 730 ntBASIC6.08□□□□□ -1.44
NID1P14543 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.08□□□□□ -1.44
NID1P14543 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.08□□□□□ -1.44
NID1P14543 MGAT2P1-201ENST00000449718 797 ntBASIC6.08□□□□□ -1.44
NID1P14543 AL356010.1-201ENST00000456364 102 ntBASIC6.08□□□□□ -1.44
NID1P14543 RN7SL168P-201ENST00000463821 279 ntBASIC6.08□□□□□ -1.44
NID1P14543 AC090142.1-201ENST00000465776 462 ntBASIC6.08□□□□□ -1.44
NID1P14543 AC092824.1-201ENST00000483524 576 ntBASIC6.08□□□□□ -1.44
NID1P14543 AC083904.1-201ENST00000487828 231 ntBASIC6.08□□□□□ -1.44
NID1P14543 RPS4XP18-201ENST00000495480 763 ntBASIC6.08□□□□□ -1.44
NID1P14543 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.08□□□□□ -1.44
NID1P14543 RNU6-388P-201ENST00000517012 105 ntBASIC6.08□□□□□ -1.44
NID1P14543 RNU6-389P-201ENST00000517048 105 ntBASIC6.08□□□□□ -1.44
NID1P14543 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.08□□□□□ -1.44
NID1P14543 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.08□□□□□ -1.44
NID1P14543 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC6.08□□□□□ -1.44
NID1P14543 AC023442.1-201ENST00000531247 422 ntBASIC6.08□□□□□ -1.44
NID1P14543 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.08□□□□□ -1.44
NID1P14543 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC6.08□□□□□ -1.44
NID1P14543 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC6.08□□□□□ -1.44
NID1P14543 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.08□□□□□ -1.44
NID1P14543 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC6.08□□□□□ -1.44
NID1P14543 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC6.08□□□□□ -1.44
NID1P14543 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.08□□□□□ -1.44
NID1P14543 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.08□□□□□ -1.44
NID1P14543 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NID1P14543 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.08□□□□□ -1.44
NID1P14543 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC6.08□□□□□ -1.44
NID1P14543 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NID1P14543 NAA50-211ENST00000630058 177 ntTSL 5 BASIC6.08□□□□□ -1.44
NID1P14543 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.08□□□□□ -1.44
NID1P14543 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.08□□□□□ -1.44
NID1P14543 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NID1P14543 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.08□□□□□ -1.44
NID1P14543 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
NID1P14543 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.08□□□□□ -1.44
NID1P14543 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NID1P14543 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
NID1P14543 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NID1P14543 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NID1P14543 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.08□□□□□ -1.44
NID1P14543 BRAFP1-201ENST00000445336 2703 ntBASIC6.08□□□□□ -1.44
NID1P14543 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.08□□□□□ -1.44
NID1P14543 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NID1P14543 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
NID1P14543 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NID1P14543 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.08□□□□□ -1.44
NID1P14543 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms