Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TMIGD3P0DMS9 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
TMIGD3P0DMS9 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TMIGD3P0DMS9 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
TMIGD3P0DMS9 AL022311.1-201ENST00000623726 19416 ntBASIC4.8□□□□□ -1.64
TMIGD3P0DMS9 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TMIGD3P0DMS9 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
TMIGD3P0DMS9 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
TMIGD3P0DMS9 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AL445523.1-201ENST00000451184 1362 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AL353743.4-201ENST00000422653 1547 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 RNU6-1200P-201ENST00000384162 107 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 RNA5SP241-201ENST00000391326 114 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 HSPA8P15-201ENST00000401676 786 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 PPIAP9-201ENST00000403866 498 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 ZNF885P-201ENST00000420174 1098 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AC005033.1-201ENST00000428904 813 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AC097262.1-201ENST00000452559 548 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 MTND2P28-201ENST00000457540 1044 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AC092754.2-201ENST00000463506 460 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AC092754.1-201ENST00000472975 479 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AC091912.1-201ENST00000511351 248 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 SNORD116-26-201ENST00000516006 96 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 RNA5SP135-201ENST00000517019 125 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AF186190.1-201ENST00000517470 480 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 OR5AZ1P-201ENST00000527448 943 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 GTF2IP8-201ENST00000560687 584 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 OR4K7P-201ENST00000580232 945 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 VN1R90P-201ENST00000595717 726 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AL390838.2-201ENST00000602394 274 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AC010738.1-201ENST00000604970 987 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AL592221.1-201ENST00000605266 382 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AC009163.6-201ENST00000612367 342 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AC073530.2-201ENST00000623987 261 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 Z95327.2-201ENST00000414579 1873 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 AC100757.1-201ENST00000616872 1835 ntBASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.79□□□□□ -1.64
TMIGD3P0DMS9 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
TMIGD3P0DMS9 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TMIGD3P0DMS9 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TMIGD3P0DMS9 OR55B1P-203ENST00000641518 2602 ntBASIC4.78□□□□□ -1.64
TMIGD3P0DMS9 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
TMIGD3P0DMS9 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TMIGD3P0DMS9 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.78□□□□□ -1.64
TMIGD3P0DMS9 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.78□□□□□ -1.64
TMIGD3P0DMS9 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
TMIGD3P0DMS9 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TMIGD3P0DMS9 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
TMIGD3P0DMS9 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.78□□□□□ -1.64
TMIGD3P0DMS9 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TMIGD3P0DMS9 AL391994.1-201ENST00000254724 282 ntBASIC4.78□□□□□ -1.64
TMIGD3P0DMS9 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TMIGD3P0DMS9 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
TMIGD3P0DMS9 U3.2-201ENST00000362981 210 ntBASIC4.78□□□□□ -1.64
TMIGD3P0DMS9 U8.4-201ENST00000363626 134 ntBASIC4.78□□□□□ -1.64
TMIGD3P0DMS9 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TMIGD3P0DMS9 SNORD56.6-201ENST00000384569 71 ntBASIC4.78□□□□□ -1.64
TMIGD3P0DMS9 MIR105-1-201ENST00000385222 81 ntBASIC4.78□□□□□ -1.64
TMIGD3P0DMS9 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TMIGD3P0DMS9 RNU6-1300P-201ENST00000391046 108 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 221.4 ms