Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
FREM3P0C091 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
FREM3P0C091 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.48□□□□□ -1.85
FREM3P0C091 JKAMPP1-201ENST00000413804 919 ntBASIC3.48□□□□□ -1.85
FREM3P0C091 KCTD9P3-201ENST00000434597 1169 ntBASIC3.48□□□□□ -1.85
FREM3P0C091 AL645931.1-201ENST00000439737 410 ntBASIC3.48□□□□□ -1.85
FREM3P0C091 TPTE2P3-201ENST00000441562 1189 ntBASIC3.48□□□□□ -1.85
FREM3P0C091 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.48□□□□□ -1.85
FREM3P0C091 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.48□□□□□ -1.85
FREM3P0C091 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.48□□□□□ -1.85
FREM3P0C091 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.48□□□□□ -1.85
FREM3P0C091 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.48□□□□□ -1.85
FREM3P0C091 AC106785.1-201ENST00000565935 262 ntBASIC3.48□□□□□ -1.85
FREM3P0C091 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.48□□□□□ -1.85
FREM3P0C091 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
FREM3P0C091 AL645927.2-201ENST00000618350 349 ntBASIC3.48□□□□□ -1.85
FREM3P0C091 AC000123.3-201ENST00000624029 4975 ntBASIC3.48□□□□□ -1.85
FREM3P0C091 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.48□□□□□ -1.85
FREM3P0C091 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.48□□□□□ -1.85
FREM3P0C091 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
FREM3P0C091 DDX18P6-201ENST00000450119 1997 ntBASIC3.48□□□□□ -1.85
FREM3P0C091 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
FREM3P0C091 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
FREM3P0C091 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.48□□□□□ -1.85
FREM3P0C091 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.48□□□□□ -1.85
FREM3P0C091 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
FREM3P0C091 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
FREM3P0C091 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.47□□□□□ -1.85
FREM3P0C091 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
FREM3P0C091 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.47□□□□□ -1.85
FREM3P0C091 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.47□□□□□ -1.85
FREM3P0C091 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.47□□□□□ -1.85
FREM3P0C091 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.47□□□□□ -1.85
FREM3P0C091 RPL6P5-201ENST00000445678 828 ntBASIC3.47□□□□□ -1.85
FREM3P0C091 AL451050.1-201ENST00000450126 415 ntBASIC3.47□□□□□ -1.85
FREM3P0C091 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.47□□□□□ -1.85
FREM3P0C091 RPL7L1P8-201ENST00000469911 741 ntBASIC3.47□□□□□ -1.85
FREM3P0C091 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.47□□□□□ -1.85
FREM3P0C091 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.47□□□□□ -1.85
FREM3P0C091 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.47□□□□□ -1.85
FREM3P0C091 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
FREM3P0C091 AC015967.1-201ENST00000619893 476 ntBASIC3.47□□□□□ -1.85
FREM3P0C091 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.47□□□□□ -1.85
FREM3P0C091 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
FREM3P0C091 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
FREM3P0C091 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
FREM3P0C091 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
FREM3P0C091 UBE3AP2-201ENST00000429033 2259 ntBASIC3.47□□□□□ -1.85
FREM3P0C091 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
FREM3P0C091 AC007389.2-201ENST00000434630 306 ntBASIC3.47□□□□□ -1.85
FREM3P0C091 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
FREM3P0C091 AC006511.1-201ENST00000470614 315 ntBASIC3.47□□□□□ -1.85
FREM3P0C091 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
FREM3P0C091 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.47□□□□□ -1.85
FREM3P0C091 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC3.47□□□□□ -1.85
FREM3P0C091 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.47□□□□□ -1.85
FREM3P0C091 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.47□□□□□ -1.85
FREM3P0C091 HMGB1P50-201ENST00000605814 607 ntBASIC3.47□□□□□ -1.85
FREM3P0C091 AL391497.1-201ENST00000608671 547 ntBASIC3.47□□□□□ -1.85
FREM3P0C091 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.47□□□□□ -1.85
FREM3P0C091 AC243312.2-201ENST00000623340 601 ntBASIC3.47□□□□□ -1.85
FREM3P0C091 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.47□□□□□ -1.85
FREM3P0C091 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
FREM3P0C091 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
FREM3P0C091 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
FREM3P0C091 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
FREM3P0C091 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
FREM3P0C091 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.46□□□□□ -1.85
FREM3P0C091 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
FREM3P0C091 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
FREM3P0C091 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
FREM3P0C091 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.46□□□□□ -1.86
FREM3P0C091 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.46□□□□□ -1.86
FREM3P0C091 SNORA70.4-201ENST00000365509 134 ntBASIC3.46□□□□□ -1.86
FREM3P0C091 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
FREM3P0C091 ATP5F1P3-201ENST00000397213 657 ntBASIC3.46□□□□□ -1.86
FREM3P0C091 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.46□□□□□ -1.86
FREM3P0C091 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
FREM3P0C091 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.46□□□□□ -1.86
FREM3P0C091 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
FREM3P0C091 HNRNPKP5-201ENST00000515300 253 ntBASIC3.46□□□□□ -1.86
FREM3P0C091 RNA5SP164-201ENST00000516533 110 ntBASIC3.46□□□□□ -1.86
FREM3P0C091 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.46□□□□□ -1.86
FREM3P0C091 AP003392.5-201ENST00000607857 415 ntBASIC3.46□□□□□ -1.86
FREM3P0C091 AC073530.2-201ENST00000623987 261 ntBASIC3.46□□□□□ -1.86
FREM3P0C091 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
FREM3P0C091 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
FREM3P0C091 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
FREM3P0C091 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
FREM3P0C091 TTC39DP-201ENST00000416781 1688 ntBASIC3.46□□□□□ -1.86
FREM3P0C091 CYP1D1P-201ENST00000416662 1433 ntBASIC3.46□□□□□ -1.86
FREM3P0C091 MTND2P11-201ENST00000423638 648 ntBASIC3.46□□□□□ -1.86
FREM3P0C091 USP12PY-201ENST00000427677 1064 ntBASIC3.46□□□□□ -1.86
FREM3P0C091 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.46□□□□□ -1.86
FREM3P0C091 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.46□□□□□ -1.86
FREM3P0C091 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
FREM3P0C091 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.46□□□□□ -1.86
FREM3P0C091 PAICSP4-201ENST00000517543 1253 ntBASIC3.46□□□□□ -1.86
FREM3P0C091 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.46□□□□□ -1.86
FREM3P0C091 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms